Pairwise Alignments

Query, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  652 bits (1682), Expect = 0.0
 Identities = 325/609 (53%), Positives = 440/609 (72%), Gaps = 2/609 (0%)

Query: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60
           +F++FEKL  P+PA EP  PP+   AF    T G    +  M++L+A +++ E  L   +
Sbjct: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62

Query: 61  GRIVDWLGGQVPSRLWEDRGTTLMWLAAFLVISIGVVAL-QTIVKHQTLAVNLPMRLRWN 119
           G IVD L  Q   + WE  G  L  +AA +++ + ++AL  +++ HQT+  N PM +RW+
Sbjct: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122

Query: 120 FHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVL 179
            HR +L QS+ F+Q +FAGR+  KVMQ A +VRET+  L D+ V + VY+ +M++++   
Sbjct: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182

Query: 180 DAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHT 239
           D  LV P L+WL+ Y+   +YFVPRL  +   QA+A++ MTGR+ D YTNI TVKLFSH+
Sbjct: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242

Query: 240 QREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGA 299
           QRE  +A+  M++F+HT Y QMR +++       ++  L   +A +++ LW    V VG 
Sbjct: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302

Query: 300 VAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGE 359
           +A    +ALR+QGMS WIMWE+ +LFE++GTV D M T++ P  + D   A  LQV  GE
Sbjct: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362

Query: 360 VRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRIL 419
           + F    F Y    + V DDLNL ++ GEK+G+VGRSGAGKSTLVNLLLRF+D++SG+I 
Sbjct: 363 LSFSQVRFGYS-AQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIR 421

Query: 420 IDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDF 479
           IDGQDI+HV+Q+SLR HIGM+TQDTSL+HRS+ DN+ YG PDA +  IE AAR+A AHDF
Sbjct: 422 IDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDF 481

Query: 480 IQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEA 539
           IQ L D  GR GY+  VGERGVKLSGGQRQR+AIARV+LK+APIL++DEATSALDSEVE+
Sbjct: 482 IQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVES 541

Query: 540 AIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWA 599
           AIQ++L+TLM GKTVIAIAHRLSTIAAMDRLIV+DEG++VE+G H+ L+A  G+YA+LWA
Sbjct: 542 AIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWA 601

Query: 600 HQSGGFLGE 608
           HQ+GGF+GE
Sbjct: 602 HQTGGFIGE 610