Pairwise Alignments

Query, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

Subject, 604 a.a., MsbA-like saccharide exporting ABC transporter ATP-binding/permease subunits from Sinorhizobium meliloti 1021

 Score =  294 bits (752), Expect = 9e-84
 Identities = 207/604 (34%), Positives = 309/604 (51%), Gaps = 35/604 (5%)

Query: 25  FAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAILGRIVDWL--GGQVPSRLWEDRGTT 82
           F F W        ++AA+ +   + ++ +       GR+VD +  G       W      
Sbjct: 17  FRFSWDHWKKQPVRLAALLLTVLLSTLADVLTPLYSGRLVDAVISGAASDDVAWNAAMAA 76

Query: 83  LMWLAAFLVISIGVVALQTIVKHQTLAVNLPMR---LRWNFHRLMLGQSMAFYQDEFAGR 139
            M L A   +S G + L+ +     +++ L M        FH +    S  ++ + FAG 
Sbjct: 77  FMMLMA---LSFGAIILRHVTFMGIVSLTLKMMSDIAAAAFHHIQRFSS-DWHANSFAGS 132

Query: 140 ITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVLDAQLVWPFLIWLVLYVVSLI 199
              KV +   A+     +L D L+       ++++LVG   A + W + +  V+  +  I
Sbjct: 133 TVRKVTRGMWALD----LLNDTLLV--ALFPSIVMLVGST-ALMAWYWPMMGVIIGLGSI 185

Query: 200 YFVP-----RLGKVGKAQADARALMT---GRVTDAYTNIATVKLFSHTQREAGFARDAMR 251
            F+       LG V    + A +  T   G + DA +    VK F    RE       +R
Sbjct: 186 AFIAVTVSLSLGYVAPMASLANSWDTRLGGALADAVSCNTVVKAFGAEGREDARLAKVLR 245

Query: 252 EFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGAVAAATAMALRLQ 311
           ++ +         +        + + L A + G AL LW+ G    G +         LQ
Sbjct: 246 KWENRTRRTWSRGTLNGTAQGAMLLVLRAAVIGFALLLWARGQATAGDITFVLTSFFILQ 305

Query: 312 GMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGEVRFEHASFRYGD 371
           G    +   + +L  +I  +++ +   ++P  V D   A  +++ +GE+ F   +F YG 
Sbjct: 306 GYLREVGMHIRNLQRSINDMEELVAIHAQPLGVEDRPGAKPIRITEGEIEFRDVTFHYGA 365

Query: 372 GGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRILIDGQDIAHVTQD 431
               + +  ++ +  GE++GLVG SG+GK+T + L+ R HDL +G I IDGQ+IA  TQ 
Sbjct: 366 HRAPLYEGFSVNIAAGERVGLVGHSGSGKTTFIKLIQRLHDLNAGEIRIDGQNIADFTQA 425

Query: 432 SLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDFIQTLGDAGGRRG 491
           SLR  I +V Q+  L HRS+A+N+AY RP AT+  IE AAR A AHDFI  L      +G
Sbjct: 426 SLRQQIAIVQQEPILFHRSLAENIAYARPGATQRDIEEAARLASAHDFIAAL-----PKG 480

Query: 492 YEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEAAIQQSLYTLMEG 551
           Y   VGERGVKLSGG+RQRVAIAR  L DAPIL+LDEATS+LDSE E  IQQ++  LM G
Sbjct: 481 YGTLVGERGVKLSGGERQRVAIARAFLADAPILILDEATSSLDSESEVLIQQAMERLMTG 540

Query: 552 KTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLM-AQGGLYARLWAHQS-----GGF 605
           +T + +AHRLST+ A+DRL+V D GR+ EEGDH  L+  +GG+Y  L+  Q+     G  
Sbjct: 541 RTTLVVAHRLSTVRALDRLLVFDRGRIAEEGDHGALIRVKGGIYRSLFERQALELTKGLI 600

Query: 606 LGEG 609
           L EG
Sbjct: 601 LSEG 604