Pairwise Alignments

Query, 350 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  288 bits (737), Expect = 1e-82
 Identities = 149/309 (48%), Positives = 201/309 (65%), Gaps = 9/309 (2%)

Query: 8   TLLRVQDLHVEFKTRRGQALVLNGVDFEIRAGETLCVVGESGCGKSMTALALLRLIPSPP 67
           +LL V+DL VEF T+ G    +N ++F ++ GETL +VGESG GKS T  A++ L+ +  
Sbjct: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLL-AKN 61

Query: 68  GRIRSGQVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVGEQIGESLRLHA 127
           G+I +G   F+G++++   +  + +VR  +I+MIFQ+PMTSLNP   V +Q+ E L LH 
Sbjct: 62  GKI-TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120

Query: 128 GLNAHAASERAIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALACRPDILIADEP 187
           G+    A E ++ ML  V IP   +R+  YPH+ SGGMRQRVMIAMAL CRP +LIADEP
Sbjct: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180

Query: 188 TTALDVTVQAQIFDLLRELQRDKGTAIMLITHDMGAVAEMADRVMVMYAGRVIEQGTTEQ 247
           TTALDVTVQAQI +LL EL+R+  TAI++ITHD+G VA   D+V+VMYAGR +E G+   
Sbjct: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 248 VLSEPGHPYTRGLIDCLPELGSSAAYGDGAREELAEIAGVVPSIWELGTGCAFRERCPRA 307
           +   P HPY  GL+  +P L       D   E L  I G  P++  L  GC ++ERC R 
Sbjct: 241 IFYNPSHPYAEGLLSAIPRL-------DTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRV 293

Query: 308 LARCATEVP 316
             RC  E P
Sbjct: 294 TDRCKREAP 302