Pairwise Alignments

Query, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  219 bits (557), Expect = 8e-62
 Identities = 119/286 (41%), Positives = 171/286 (59%), Gaps = 15/286 (5%)

Query: 27  PGMEALRMFLRNPAAIAGMAMLLIVLAVAIAGPWVYPADPFE-IKAAPLTPPFSEDAWL- 84
           P  E    F RN  A+AG+  +++++  A+  PWV P DP E  +   LTPP    AWL 
Sbjct: 19  PYKEFWHAFSRNKGAVAGLLFMILIVFCALFAPWVAPHDPSEQYRDFLLTPP----AWLE 74

Query: 85  --------GSDYLGRDVLTALIYGGRATLLVGAVAALLSVLIGITLGAFAGYYGGKIDAA 136
                   G+D LGRD+L+ LI G R +LL+G  + ++S++ GI LG FAG++   +   
Sbjct: 75  GGQIQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRILGPT 134

Query: 137 LMKLTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGIVSWTGTARLTRAEFMKYRGLEFV 196
           +M+L +    LP+LL A+ +V +  P L+   +AI IVS     RLTRA  M     ++V
Sbjct: 135 IMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYV 194

Query: 197 RAERAIGAGDARIIWKVILPNALPPLVVSATLAIGAAILFEAGLSFLGLG-DPNQMSWGL 255
            A R  GAG  R+++  +LPN + PL+V ATL+  +AIL  A L FLGLG  P    WG 
Sbjct: 195 TAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGT 254

Query: 256 MIGSSRQYVLSCWWAVAFPGAAIFITVLAVSLIGDGLNDALNPKLR 301
           M+ S+R Y+   WW V+ PG  I ++VLA++L+GDGL DAL+PKL+
Sbjct: 255 MLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 300