Pairwise Alignments

Query, 537 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  124 bits (311), Expect = 9e-33
 Identities = 137/509 (26%), Positives = 221/509 (43%), Gaps = 60/509 (11%)

Query: 28  LLPLSVFA---AAEPKRGGTLVIGSTQTPRHLNGAVQSGIATAMPSTQ-------IFASP 77
           +L L V A   AA  + GGTLV  +          VQS      P+TQ       I  + 
Sbjct: 10  MLSLGVAAGALAAGERHGGTLVFTAPYGSSFATLDVQSS-----PNTQEEFITQAIHRAL 64

Query: 78  LRFDDKWN-PQPYLAESWKLADDGKSLTLKLRKDALFHDGKPVTSADVAFS--------- 127
             +D   N P   LA S ++++DGK  T  LRK+A+FH+GKP+T+ D+ +S         
Sbjct: 65  YSWDSNQNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSYKRIANPEN 124

Query: 128 -------ILAIKANHPF----TTMMGPVEKVDTPDAYTAVVRMSVPHPAIVLAMSPALCP 176
                  I  IK    +       +  ++K+D  D    +      +P   L  +  +  
Sbjct: 125 AFPGASFIAVIKGAEDYIAGKADEISGLKKID--DHTLEITYTGTINPGFPLMQNTTV-- 180

Query: 177 ILPKHIYGDGQDLKNHPRNTTDVIGSGPYRVTDFKPAQRVVLERFDKFFIPGRPYLDKII 236
           I P ++ G+    KN        +G G +   +  P  +VV+E+FDK++  GRPYLD+I 
Sbjct: 181 IYPSNVEGESTFGKN-------PVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLDRIN 233

Query: 237 INITPDSASLMLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKGYDGIGALNWLAFNT 296
           I +  + A+  +     +I +      PT  +    +  +         +   N + FN 
Sbjct: 234 IVLMAEDAARDVAFRNKEIDVSILG--PTQYQAYQGEEGLKDHLLEVAEVYTRN-IGFNP 290

Query: 297 AKKPLSDVQVRKAIATAIDKNFITKALMGGFATVSDGPLVASSPFAVPDLVRYPLDLKKA 356
           A +P  D +VR+AI  AI+   I + L+   A  + G L  SSP    D   Y  D +KA
Sbjct: 291 AFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLPISSPAFDKDKAPYAYDPEKA 350

Query: 357 GEMLDAAGYKAGAGGERFKLTIDYLPGVDDQQKNVAEYIRGQLKKVGITVEVRASADFPA 416
             +L  AGY  G     F+  +   P  +     + E I   LKKVGITV+ +   +   
Sbjct: 351 KALLAEAGYADG-----FEFEVTASPN-ESWGVPIVEAILPMLKKVGITVKPK-PVESST 403

Query: 417 WAKRLASHDFDMSMDTVFNWGDPIIGVHRTYLSTNIKPIVWTNTQSYANPKVDELLNTAG 476
             + + +++F   + +  +  DP+  + R Y S   +     N  SYA+P+ D+L   A 
Sbjct: 404 LGEAVTTNNFQAFIWSNLSGPDPLNAL-RCYYSKTAQSA--CNYTSYASPEFDKLYEAAQ 460

Query: 477 GLIDATQRKAYYATFQKIVTDELPIEFIN 505
              D+ ++         IV D+ P+ F N
Sbjct: 461 QERDSAKQNDLLRQANNIVQDDAPVWFFN 489