Pairwise Alignments

Query, 537 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  110 bits (276), Expect = 1e-28
 Identities = 128/526 (24%), Positives = 223/526 (42%), Gaps = 51/526 (9%)

Query: 14  RATLLSASFAAAGTLLPLSVFAAAEPKRGGT----LVIGSTQTPRHLNGAVQSGIATAMP 69
           R+ +  A+ A AG        AAA P    T    LV+G    P+ L+    +       
Sbjct: 6   RSAIALAALAFAG--------AAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRI 57

Query: 70  STQIFASPLRFDD-KWNPQPYLAESWKLADDGKSLTLKLRKDALFHDGKPVTSADVAFSI 128
              ++   +RF D     +P LAESWK++DDGK+ T  LR+   FHDG    +  V F+ 
Sbjct: 58  LVNVYDGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNF 117

Query: 129 -LAIKANHPFTTMMGP---------VEKVDTPDAYTAVVRMSVPHPAIVLAMS-PALCPI 177
              +K +HPF    GP         V+ V+  D +T   ++S      +  ++ P    +
Sbjct: 118 DRMLKKDHPFYDT-GPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIV 176

Query: 178 LPKHIYGDGQDLKNHPRNTTDVIGSGPYRVTDFKPAQRVVLERFDKFFIPGRPYLDKIII 237
            P  +   G++    P       G+GP++  ++   QRVV+ER   ++      L  ++ 
Sbjct: 177 SPVAVEKHGKEYGRSPS------GTGPFKFVEWLSNQRVVVERNPDYW-DSAAKLQAVVF 229

Query: 238 NITPDSASLMLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKGYDGIGALNWLAF-NT 296
               D+ + +  +  G I ++     P +L     D   ++  +     G   W    NT
Sbjct: 230 RPITDANTRVAEMMAGGIDVM-VEVPPDNLATFEQDANFAVAEQA----GPHVWFTILNT 284

Query: 297 AKKPLSDVQVRKAIATAIDKNFITKALMGGFATVSDGPLVASSPFAVPDLVRYPLDLKKA 356
            + P +D +VR+A   A++K  +   ++ G ATV+ GP+  +  +    +  Y  D +KA
Sbjct: 285 KQGPFADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKA 344

Query: 357 GEMLDAAGYKAGAGGERFKLTIDYLPGVDDQQKNVA--EYIRGQLKKVGITVEVRASADF 414
             +L      A AG E  ++T     G       +     I+  L+ VG  V++  + ++
Sbjct: 345 KALL------AEAGVENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIE-TYEW 397

Query: 415 PAWAKRL---ASHDFDMSMDTVFNWGDPIIGVHRTYLSTNIKPIVWTNTQSYANPKVDEL 471
             +  R+        DM+ +  +   DP    + T  +  +      N+  Y+NP++DEL
Sbjct: 398 NTFLGRVNPGLEGKADMA-EMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDEL 456

Query: 472 LNTAGGLIDATQRKAYYATFQKIVTDELPIEFINQVPYHTVSSKKV 517
           L  A    D  +R   Y   Q IV D+ P  F+     + V++  V
Sbjct: 457 LEKARRSTDQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAV 502