Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 304 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (289), Expect = 9e-31
 Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 17/306 (5%)

Query: 1   MQILTQLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVG-LTLVNMGLN 59
           M    Q + +G+ LG IY +IA GY + +     +NF  G   M+GA +  +  V +G  
Sbjct: 1   MAYFLQQLINGLTLGAIYGLIAIGYTMVYGIIGMINFAHGEIYMIGAFLTVICFVLLGGP 60

Query: 60  YWLMIPLVCL--------FGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAE 111
            +  +PL  L        F A  G  VER+A RP ++       ++S I + I   N  +
Sbjct: 61  EFASVPLALLLILVVSMVFTAAYGWTVERLAYRP-LRGSFRLAPLISAIGMSIALQNYVQ 119

Query: 112 NVWGRDDLKFPSPLPESPLHFLG-----ANVLPMEILVVIGALLMMLAVELFNRRSIYGK 166
              G   +K   P+                +  ++I + I  + +M+       ++  G+
Sbjct: 120 ITQGAR-VKPIQPVIRGGFEVFNQGGFAVQISYLQIFIWILTIGLMMGFTYVITQTSMGR 178

Query: 167 AVVATFNDRDAAKLMGINTGLVITFSYALSSMTAAFAGVLIAPLT-LTGASMGAVLGLKA 225
              A   DR  A L+G+N    I+ ++ + ++ AA AG++      +    +G + G+KA
Sbjct: 179 QQRACEQDRKMASLIGVNVDRTISLTFVIGALLAAVAGLITTLYYGVIDFYIGFLAGMKA 238

Query: 226 FAVAIIGGLTSGMGIVVGGIILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGK 285
           F  A++GG+ S  G ++GG+++G+ E     Y +  YKDV    +L++VL  +P+G  GK
Sbjct: 239 FTAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFTIEYKDVATFGILVLVLIFKPTGFLGK 298

Query: 286 AAIKKV 291
             ++KV
Sbjct: 299 PEVEKV 304