Pairwise Alignments

Query, 402 a.a., Flagellar hook protein FlgE from Variovorax sp. SCN45

Subject, 460 a.a., flagellar hook protein FlgE (RefSeq) from Rhodospirillum rubrum S1H

 Score =  136 bits (342), Expect = 1e-36
 Identities = 128/464 (27%), Positives = 195/464 (42%), Gaps = 78/464 (16%)

Query: 4   SIYVGMTGLLGYSRGLRVIANNTANINTPGFKSSSIQFSDLFYTGGNLSGGNASRNQDQL 63
           S+ V ++ +   S  +  I+NN AN +T G+K+S+  F  L    G+ S           
Sbjct: 7   SLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFT-------- 58

Query: 64  GFGLNTTGTAISFKQGELRQTGNDLDLAVDGQGMFILKNADG--QLSYTRAGQFKFDAAG 121
           G G+  + T     QG +  T N  DLAVDG+GMFI+ +  G  +L YTRAG F  +A G
Sbjct: 59  GAGVVASATQNVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADG 118

Query: 122 ELVSRVN--------GEKVMGLDSHGNFTA----VSLAGQMLERGQPTSRIKLTGLLSNS 169
           +LV+  N            + L + GN  A    ++LAG      + TS + +  +L   
Sbjct: 119 DLVNSNNYYLQGYPTDRNGVPLTNTGNSGASLETINLAG-ATGAAKATSEMSIQAVLPAQ 177

Query: 170 ITAGDFQPNPP----TPDSGINVIDAGGVSHLLNPKFTTVTTGAGATLKFELLDGTTVVG 225
            TAGD    PP    T  S + + D+ GV+H +  K+T ++        ++    + + G
Sbjct: 178 ATAGDSTAVPPVAAYTSSSDVEIYDSLGVAHTMTVKWTKMSDTKWTMTLYDPKLSSDMTG 237

Query: 226 SGNLAFADGKPTAATALVPITYAPPG-----------------QPPMSLTIDFSSDISFW 268
               A +    T     VP    PP                  + P  L +  + D S  
Sbjct: 238 DATGAIS--STTTGVTDVPANAGPPATSHGIAVDVEFTDQGLLKTPSVLALKITPDASNG 295

Query: 269 AG-------------------------------AYGVKVQSQDGVTPGSLTGAVFDASGT 297
            G                               A  +K   QDGVT G+        +G 
Sbjct: 296 TGAAISEIALNLGTAGKANGLSTYSNEDSDGKPAVDLKKVVQDGVTYGTYYSNTISKAGL 355

Query: 298 LRMNYSNGRNIKGPRLALARFDSPDAVGAAGNNQFK-SLDENAWHIGTAGEGAFGNVRSG 356
           +  N++NG +    ++ LA F + + + A     +  ++        TAG G  G V SG
Sbjct: 356 VYANFTNGISYPIYQVPLAMFSNVNGLEAVSGTAYSATVKSGTPTYVTAGTGGSGGVSSG 415

Query: 357 QVEISNVDLSQEFSDLVVMQRGYQASSQVISTANEMLQQLFSMK 400
            VE S VD + EFS L+V Q+ Y A++Q+IS+  EM Q L S K
Sbjct: 416 SVESSTVDTAAEFSKLIVSQQAYSAATQIISSNQEMFQNLISAK 459