Pairwise Alignments

Query, 480 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  748 bits (1932), Expect = 0.0
 Identities = 347/475 (73%), Positives = 399/475 (84%)

Query: 2   MQEPKPPAAEYDDTVVRQFALMSVVWGVVGMLVGVVIASQLTWPELNLGIPWLSYGRLRP 61
           M + K     Y+ TVVRQF L++++WG+VGM VGV+IA+QL WP+LN   PWL+Y RLRP
Sbjct: 3   MSQEKQLEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRP 62

Query: 62  LHTNAVIFAFGGCALMATSFHVVQRTCQVRLFAPKLASFVFWGWQAVIVAAAISLPMGYT 121
           LHTNAVIFAFG  AL ATS++VVQRTCQ RLF   L  F FWGWQA+IV+AAI+LP+GYT
Sbjct: 63  LHTNAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYT 122

Query: 122 RGKEYAELEWPIGVLIAVVWVAYAVVFFGTIGRRKVRHIYVANWFYGAFIIAVALLHIVN 181
            GKEYAELEWPI + IA VWVAYAVVFFGT+ +RK  HIYVANWF+GAFII VA+LHIVN
Sbjct: 123 SGKEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVN 182

Query: 182 GAVVPAGWMKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYYIPKQAGRPVYSYR 241
              +P    KSYS YAG  DAMVQWWYGHNAVGF LTAGFLGMMYY++PKQA RPVYSYR
Sbjct: 183 SMALPVSMGKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYR 242

Query: 242 LSIVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVFSLILLAPSWGGMINGVMTLSGAW 301
           LSIVHFWALI  Y+WAGPHHLHYTALPDWTQSLGMV SL+L APSWGGMING+MTLSGAW
Sbjct: 243 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAW 302

Query: 302 HKLRTDPILRFLIVALSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVGFIS 361
           HKLR DPILRFLIV+LSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWV  +S
Sbjct: 303 HKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVS 362

Query: 362 MGSLYYLIPRMYGRTAMYSTRAIEVHFWIATIGIVLYIAAMWIAGVMQGLMWRSINPDGT 421
           +GS+Y+LIPR++G+  MYS   I  HFW+ATIG VLYI AMWI+GVMQGLMWR++N DGT
Sbjct: 363 IGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGT 422

Query: 422 LTYTFVESVKATFPFYLVRVIGGVLYLSGMLLMAWNFWMTVISGRAARAEIPPPA 476
           LTY+FVESV+A++PFY VR IGG ++LSGM LMA+N + T+ + + +   I  PA
Sbjct: 423 LTYSFVESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPKNSLKAIVQPA 477