Pairwise Alignments

Query, 209 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 201 a.a., cytochrome c oxidase, cbb3-type, subunit II (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (660), Expect = 4e-74
 Identities = 119/199 (59%), Positives = 149/199 (74%)

Query: 11  FTHEKIETNNLLMIVLILVVVAVGGLVEIVPLFFQKSTTEAVQGVKPLTPLQLAGRDVYL 70
           F HE +E N  L+ +  ++ +++GGLV+I PL FQK TTE V G++P + L+L GRD+Y+
Sbjct: 3   FNHEIVEKNIGLLGIFTVIAISIGGLVQITPLLFQKDTTEPVNGLRPYSALELEGRDIYI 62

Query: 71  REGCYNCHSQMIRPFRSETLRYGHYSVAGEFVYDHPFQWGSKRTGPDLHRVGGKYSDEWH 130
           REGC  CHSQMIRP R+ET RYGHYSVAGE V+DHPF WGSKRTGPDL RVGG+YSD+WH
Sbjct: 63  REGCVGCHSQMIRPLRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDKWH 122

Query: 131 RIHLNNPRDVVPESNMPAYTWLEKTLVDAEALPAHMRALRRVGVPYSDAEIAGATEEVRG 190
            +HL +PR VVP+SNMPA+ WL + ++D E     M   R  GVPYS  +I  A + V G
Sbjct: 123 EVHLLDPRAVVPQSNMPAFPWLAENVLDGELTAKKMEVFRGFGVPYSQDDIDNAKKAVEG 182

Query: 191 KTEMEATVAYLQSLGLALK 209
           KTEM+A +AYLQSLG ALK
Sbjct: 183 KTEMQALIAYLQSLGHALK 201