Pairwise Alignments

Query, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 25/176 (14%)

Query: 143 CAQCHGSDARGSKG-FPDLT--DKDWLYGGTPERITESITKGRVGVMPPMAAAVG---TS 196
           CA CHG+D       +P L    + +L     E    + + G+ G   P+ +A+    + 
Sbjct: 32  CAACHGADGNSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSD 91

Query: 197 DDVKNVANYVLS--LSGE--PHDSV-------RAGLGKSKFTVCVACHGVGGVGNQTLGA 245
           +D+ ++A Y  S  +SG   P D V        AG      T C+ACHG  G G +  G 
Sbjct: 92  EDIADLAAYYASMPISGNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPRGNGTELSGF 151

Query: 246 PNLSDKIWLHGYGEAAIIQMINSGKR-NEMPAQER----RLTEAQIRMVASYVWGL 296
           P +S +   H     A ++   SG R N+M    R    +LT+A I +++ YV GL
Sbjct: 152 PKISGQ---HADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGL 204