Pairwise Alignments

Query, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 287 a.a., FixP2 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

 Score =  186 bits (472), Expect = 6e-52
 Identities = 109/276 (39%), Positives = 146/276 (52%), Gaps = 20/276 (7%)

Query: 39  SADNTTGHVWDGDLREANNPLPMWWVGLFVLTIVFGLGYLAVFPG----LGSFRGQSDWT 94
           S   TTGH WDG +RE NNPLP WWV  F  TI++ +GY   +P       S +G   ++
Sbjct: 10  SGVETTGHEWDG-IRELNNPLPRWWVYSFYATIIWAIGYAVAYPSWPMLTESTKGVLGYS 68

Query: 95  SRGEYEAEVAKATQELAPVYAKYTAMPVEEIARDPQ----AHAIGERLFMGNCAQCHGSD 150
           SR E  AE+A+A    A    +  +  VE+I  +P+    A  IG   F  NCAQCHGS 
Sbjct: 69  SRAEVSAELAEAKAAQAGNLERIASSAVEDIMANPELKQFAITIGASAFKVNCAQCHGSG 128

Query: 151 ARGSKGFPDLTDKDWLYGGTPERITESITKG---------RVGVMPPMAAAVGTSDDVKN 201
             G KGF +L D +WL+GG PE I ++I  G         RV  MP     +   + V+ 
Sbjct: 129 TAGGKGFTNLNDDEWLWGGKPEEIYQTIAHGIRYSGDGETRVSEMPAFTDTLAPRE-VRA 187

Query: 202 VANYVLSLSGEPHDSVRAGLGKSKFTV-CVACHGVGGVGNQTLGAPNLSDKIWLHGYGEA 260
            A YV SL+G P +      GK  F   C +CHG    G +  GAPNL+D IWL+G GE 
Sbjct: 188 TAAYVASLTGTPSNPALVEPGKQLFAENCASCHGADAKGTREFGAPNLADAIWLNGEGEQ 247

Query: 261 AIIQMINSGKRNEMPAQERRLTEAQIRMVASYVWGL 296
           AII  + S K   MPA  +R+ +  ++ +A +V  L
Sbjct: 248 AIIDQMKSPKHGVMPAWLQRIGDPVVKELAVFVHSL 283



 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 12/89 (13%)

Query: 221 LGKSKFTV-CVACHGVGGVGNQTLGAPNLSDKIWLHGYGEAAIIQMINSGKR-------- 271
           +G S F V C  CHG G  G +  G  NL+D  WL G     I Q I  G R        
Sbjct: 112 IGASAFKVNCAQCHGSGTAGGK--GFTNLNDDEWLWGGKPEEIYQTIAHGIRYSGDGETR 169

Query: 272 -NEMPAQERRLTEAQIRMVASYVWGLSNS 299
            +EMPA    L   ++R  A+YV  L+ +
Sbjct: 170 VSEMPAFTDTLAPREVRATAAYVASLTGT 198