Pairwise Alignments

Query, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 322 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella sp. ANA-3

 Score =  266 bits (681), Expect = 4e-76
 Identities = 134/322 (41%), Positives = 189/322 (58%), Gaps = 29/322 (9%)

Query: 5   ISRFWSNYVAVISLLSILGCVILLWLTARKRVAPSADNTTGHVWDGDLREANNPLPMWWV 64
           +S FWS +++V+SL  I GC +LL + ++         + GH +DG + E NNPLP WW 
Sbjct: 1   MSSFWSIWISVLSLTVIAGCFLLLRVCSKNTTDVKEGESMGHSFDG-IEELNNPLPKWWS 59

Query: 65  GLFVLTIVFGLGYLAVFPGLGSFRGQSDWTSRGE-------------------------- 98
            +F +TIVFGL YLA+FPGLG+++G  +WTS  +                          
Sbjct: 60  YMFYITIVFGLVYLALFPGLGNYKGLLNWTSSNQSIGTEKGIKADSAAAIELAAKEGMYV 119

Query: 99  -YEAEVAKATQELAPVYAKYTAMPVEEIARDPQAHAIGERLFMGNCAQCHGSDARGSKGF 157
            Y+ EV  A ++  P++A Y A P+EE+ ++ +A  +G RLF+ NCAQCHGSDARGSKGF
Sbjct: 120 QYDQEVKHANEKYGPIFAAYLATPLEELVKNQEALKVGGRLFLQNCAQCHGSDARGSKGF 179

Query: 158 PDLTDKDWLYGGTPERITESITKGRVGVMPPMAAAVGTSDDVKNVANYVLSLSGEPHDSV 217
           P+LTD DWLYGG    I  +I  GR G+MPP         ++  +A YV+ LSG  HD  
Sbjct: 180 PNLTDSDWLYGGDLATIKTTIMNGRHGMMPPKGGLPIDDSEIAGLAEYVVKLSGREHDEK 239

Query: 218 RAGLGKSKFTV-CVACHGVGGVGNQTLGAPNLSDKIWLHGYGEAAIIQMINSGKRNEMPA 276
            A  G+  F   C ACHG+   GN+ +GAPNL+D +WL+G     I + I  G+   MPA
Sbjct: 240 LAAQGQGSFMKGCFACHGMDAKGNKLMGAPNLTDDVWLYGGSRGMIEETIKHGRAGVMPA 299

Query: 277 QERRLTEAQIRMVASYVWGLSN 298
            +  L E ++ ++A+YV+ LSN
Sbjct: 300 WKDVLGEEKVHVIAAYVYSLSN 321