Pairwise Alignments

Query, 475 a.a., Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation from Variovorax sp. SCN45

Subject, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

 Score =  406 bits (1043), Expect = e-118
 Identities = 201/465 (43%), Positives = 277/465 (59%), Gaps = 14/465 (3%)

Query: 12  NPGAGGGEEVGLYEATKKIYPRSVCGMFARWR----WAMVLLTQLVFYGMPWVEWGGRQM 67
           NP    G+    +  + +IY R   G + + R    W ++LL  LV    PW+ +G RQ 
Sbjct: 17  NPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLV----PWISYGDRQA 72

Query: 68  VLFDLAARRFYIFGLVLYPQDLIYLSGLLVISALSLFLFTTVAGRLWCGYACPQTVYTEI 127
           +L D+  ++F  FG  LYPQDL  L+ L +I+A  LF  TT  GR+WCGY CPQTV+T +
Sbjct: 73  ILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFM 132

Query: 128 FMWVEQRIEGNRVARMRLDTEPMSLEKLVKKWFKHIVWIGIAMWTGFTFVGYFTSIRELG 187
           ++W E+++EGN   R + D  PM+ E + +K  KHI W+ IA+ TGFTFVGYF  IR L 
Sbjct: 133 YIWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALV 192

Query: 188 MAFLQTQMGSWEVFWVFFYGFATYGNAGFMREQVCKYMCPYARFQSAMFDGDTLIVTYDP 247
           + F       W VFWV F+   TYGNAG+MR  +C +MCPYARFQSAMFD DT IV YD 
Sbjct: 193 IDFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDV 252

Query: 248 GRGEPRAPRRKGPDPRTMALGDCIDCGLCVQVCPTGIDIRKGLQYECIGCGVCADACDTV 307
            RGE R PR +  DP+ + LGDCIDC LCVQVCPTGIDIR GLQYECI CG C DACD  
Sbjct: 253 ARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACDNT 312

Query: 308 MQKMAYAPGLIRYDTQNGMEAGWSRRQLLRRVLRPRVLVYTAILALLVAALLASLVMRTP 367
           M++M YA GLI Y T++ +    +      +V+RP++L Y A+  +++    A +    P
Sbjct: 313 MERMGYAKGLISYTTEHRLSGKHT------KVMRPKLLGYGAVFLVMIGLFFAQVAAVDP 366

Query: 368 LKVDVVRDRASLARIAEGGRLENVYRLQIMNATEQPQQYLIAASGLDGLSVSPDQPVGVE 427
             + V+RDR  L R    G +EN Y L+++N T+QPQ Y ++  GLD +S    Q V V+
Sbjct: 367 AGLTVLRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQ 426

Query: 428 AAQSRWVAVRLQVPYGSAPPGSHTVHFSIREEGSGAQVSEKAAFL 472
             +   + + L     +      T+ F + +E     +  ++ F+
Sbjct: 427 PGEVLNLPMTLGAKPENLSSAVTTIQFILHDESHQFTLEVESRFI 471