Pairwise Alignments

Query, 450 a.a., Metallo-beta-lactamase family protein, RNA-specific from Variovorax sp. SCN45

Subject, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

 Score =  175 bits (444), Expect = 3e-48
 Identities = 136/440 (30%), Positives = 213/440 (48%), Gaps = 35/440 (7%)

Query: 1   MRIDFLGGTGTVTGSKYLLTHEGRRLMVDCGLFQGLKQLR-LRNWDALPVEPSSIDAVFL 59
           +R  FLGG+  V  +         R++VDCG+   ++  +   ++DA       IDAV +
Sbjct: 180 VRTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVV 239

Query: 60  THAHMDHSGFIPRLVRLGFRGKVHCSAATRELCELLLPDSGRLQEEDAAYANRHGHSKHE 119
           THAH+DH GFIP L R G+ G V+C+  TR+L  LL  D   + E++          K+ 
Sbjct: 240 THAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKE---------GKNV 290

Query: 120 PALPLYTEEEARAALERFEPVPFGQECAPWPGWSWQLRRAGHILGA--GSLRVGWEGASI 177
           P    Y+ ++ +  ++   P+ +G      P     +  AGHILG+      VG    ++
Sbjct: 291 P----YSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNV 346

Query: 178 LFSGDLGRSGDLLMRPPEVVDP-ADYVVVESTYG--DRGHPATD-TLAELAGVINRTAAR 233
            ++GD+      L+ P     P  + +++ESTYG  D   P  D T  E   VI  T AR
Sbjct: 347 AYTGDIKFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIAR 406

Query: 234 GGIVLIPAFAIGRAQTLLHCIQLLRQARRIPDMPVYLNSPMAADATRIYRRYPDEHRLSA 293
            G  +IP F IGRAQ L+  ++     + I + PVYL+  M  +AT I+  YP+    + 
Sbjct: 407 KGKAIIPVFGIGRAQELMLVLE-EGYNQGIFNAPVYLDG-MIWEATAIHTAYPEYLSKNM 464

Query: 294 RQCTEMQGQTIIVNTI-------EESRRLNALDFPSIIVSASGMATGGRVLHHLKAYAPD 346
           R     +G    ++ +        + R +   D P II++ SGM +GG  + + K  A D
Sbjct: 465 RNRIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADD 524

Query: 347 ARNTILFAGFQAAGTRGAAMMAGADAVKIHG-----AYVPVRAEIANLESLSAHADRDEL 401
            +N+I+F G+Q+ GT G  +  G   + + G       V V   +  LE  S H+DR +L
Sbjct: 525 EKNSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNLSVHTLEGFSGHSDRKQL 584

Query: 402 LAWLDWQK-APRRVFVTHGE 420
           + +L   K  P R+   HGE
Sbjct: 585 IKYLRKLKPIPDRILTVHGE 604