Pairwise Alignments

Query, 705 a.a., Sensory box histidine kinase/response regulator from Variovorax sp. SCN45

Subject, 1002 a.a., histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  252 bits (643), Expect = 7e-71
 Identities = 207/663 (31%), Positives = 323/663 (48%), Gaps = 52/663 (7%)

Query: 48   RIVLANPSAATLLGYAQNELVGLNVEALVPDSIRPRHASYREAYGRAPRP-RPMGTHMEL 106
            R++  NP+     G    ++VG     L+P   +  H    EAYGR  R   P+    E 
Sbjct: 382  RMLAVNPAFERHTGLT--DVVGKWSSQLLPGIEQEWH----EAYGRVARSGEPLRFEREA 435

Query: 107  VAKRKDGSEVMVEIALSPLQNHGLPFVVAAIRDIGAYPRVKQALQRARYSEHLAQLGRLA 166
                +       +  L P   H    V   I DI    RV+Q L+    +E L Q    A
Sbjct: 436  ARLGR-----WYDAHLFPAGTHD-NHVAMLIVDITPRRRVEQQLRDL--NETLEQRVVEA 487

Query: 167  VDTRDLQAVLEHVPEIITKALEVEVAMVWLLDASRAEFRVASGVGLVAGEEIGARMVNRP 226
            +  R L A      +    A +++  ++ L  AS    R+A GV    G+ +   +   P
Sbjct: 488  LAERRLFADFVDSTDAAVLACDMDFTILALNTASAEALRLAYGVSAHVGDNLLGLLDGLP 547

Query: 227  DTPPGFVLSQGRPVVVQDYGKELRFSVPKAYLEAGLVSALAVPLSDRGRVIGMLSVRSTE 286
            +          R  V + +G+ L          +G    +     D  R +    VR ++
Sbjct: 548  EH---------RAQVARHWGRAL----------SGDEFLVLEEFGDPARALRHYEVRFSQ 588

Query: 287  SK-RFGDEEVRF--LESLSSLLATSLQRTQTEEALNHAQRLESVGQLTGGIAHDFNNLLT 343
             + R G     F   + ++  + T        EAL  +Q++E+VGQLTGG+AHDFNNLLT
Sbjct: 589  LRDRHGGRVGAFQVAQDVTDRVQTEASLEVAREALRQSQKMEAVGQLTGGLAHDFNNLLT 648

Query: 344  VIQGNLQVLEELPALAQDGYAQQLLGAATRASRRGAELTGKLLAFSRRQVLQPVAVDTHA 403
             I G+L++++      +    +  +  A +A+ R A LT +LLAFSRRQ L P   D +A
Sbjct: 649  GISGSLELMQTRMGQGRFDDVECYIAVAQKAAGRAAALTHRLLAFSRRQTLAPKPTDVNA 708

Query: 404  LLYSLADMLRRTLDQRIGIEIDTAPGRPL--VVADPGQLESALLNIAINARDAMPEGGTL 461
            L+  + D++RRT+     IE+ T   + L   + DP QLE+ALLN+ +NARDAMP+G  +
Sbjct: 709  LIAGMEDLIRRTVGP--SIELTTVAEQALWPALVDPSQLENALLNLCLNARDAMPDGVRI 766

Query: 462  HFRTAICGALPAILRNQRNDPQGSAAAHFVAISIADSGSGMTDDVKERAFEPFFTTKEAG 521
               T+    L      Q   P G     ++++ ++D+G+GM +DV  R FEPFFTTK  G
Sbjct: 767  TIETS-NSWLNHSATQQNEVPDG----EYLSLCVSDTGTGMPEDVIARVFEPFFTTKPIG 821

Query: 522  RGTGLGLSTVYGFVNQSRGAVAIDSEIGQGTTVTLYLPQQEEARAPAAAEEHAGEALP-- 579
             GTGLGLS +YGF  QS G V + S +G+GTTV ++LP +    A   A+     A+P  
Sbjct: 822  EGTGLGLSMIYGFAQQSGGQVRVSSTVGEGTTVCIHLP-RHLGDATGDAQARTLPAMPRS 880

Query: 580  -AGLRVMLVEDDAEVRKVVENFLCTLGCEIVIAASTAEQALATLDTGTEPFDLLLSDIAL 638
              G  V++V+D+  VR +V + L  LG   + A   A   L+ L +     DLL++D+ L
Sbjct: 881  QQGETVLVVDDEPSVRMLVADILEELGYTALQAVDGA-SGLSVLQSDVR-IDLLITDVGL 938

Query: 639  GAGMRGTRLAAEIRQRFPRVAVLLMSGFSSELLDADREVPQGWELLRKPYTRSELARAMA 698
              GM G ++A   R   PR++VL ++G++   +    ++  G  +L KP+    +A  + 
Sbjct: 939  PGGMNGRQMADAARIARPRLSVLFITGYAETAVLGAGQLAPGMAVLTKPFGIDAMAARIR 998

Query: 699  RVL 701
             ++
Sbjct: 999  EMI 1001