Pairwise Alignments

Query, 380 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

Subject, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 8/118 (6%)

Query: 264 ISFLVGLSISGQTFYSFILENLEKFGALKAIGAKGTELIFMIFFMATFTALTGFGLGVGL 323
           IS +VG++    T ++ +LE   + G +KAIGAK  +++ +  F +    L G  LG+ L
Sbjct: 293 ISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVL 352

Query: 324 VTLMIT-----VARTQLPSYAAIVTFWNLGLAFAMVL---VIAGISSYFGIRRVLRIE 373
            T++       +A++   SY  +++  ++ +A    L   +IAGI   +   ++  +E
Sbjct: 353 GTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVE 410