Pairwise Alignments

Query, 361 a.a., Membrane protein from Variovorax sp. SCN45

Subject, 388 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 60/213 (28%), Positives = 79/213 (37%), Gaps = 56/213 (26%)

Query: 61  NVNIYPEVPALIAQVLVHDGQAVKAGTPLVMLDDSVQKATTEQLRLQAEAALALLNELQA 120
           +V I P+V  ++ +VLV +GQ VKAG  L  LDD   +A  EQ R Q             
Sbjct: 66  SVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQ------------- 112

Query: 121 QPRKEVLAIAKAQVDLAQSSLKVADDQFAKRRASYNIDPHSISKDALDTADDAVRQAAAA 180
                 LA +KAQ+D+AQ  LK         R       + IS+   D     VRQ  A 
Sbjct: 113 ------LAQSKAQLDVAQLDLK---------RYRQLTQDNGISRQTFDQQQAMVRQLEAT 157

Query: 181 LEVARRQYVLAHAGAWSYDIENQRRQYEALQQSYRASQALLQKYVVTARMDGVVLAVNAS 240
                                      +  + S  ASQ  L    + + + G V   N  
Sbjct: 158 A--------------------------KGNEASINASQVQLSYTQIRSPVTGRVGIRNVD 191

Query: 241 VGSY--VSSLGVLDSYTQTQAPLVVMSTPQDHL 271
            G++  VS    L S TQ     V  S PQ  L
Sbjct: 192 EGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQML 224