Pairwise Alignments

Query, 578 a.a., Acetate permease ActP (cation/acetate symporter) from Variovorax sp. SCN45

Subject, 572 a.a., actP-like component of L-lactate and L-malate uptake system (from data) from Shewanella loihica PV-4

 Score =  175 bits (444), Expect = 4e-48
 Identities = 142/482 (29%), Positives = 216/482 (44%), Gaps = 56/482 (11%)

Query: 66  ARTRSASDFYTAGGGITGFQNGLAIAGDYMSAASFLGISAAVMASGYDGLIYSIGFLVGW 125
           +R  S  +FY AGGG+    NG+A A D+MSAASF+ ++  V   GYDG +Y +G+  G+
Sbjct: 25  SRAGSTKEFYVAGGGVHPVMNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGWTGGY 84

Query: 126 PVITFLMAERLRNLGKFTFADVAAFRFRQTPVRIFAASGTLVVVAFYLIAQMVGAGQLIK 185
            ++   MA  LR  GKFT  D    R+     R  A    + +   Y+  QM G G +  
Sbjct: 85  VLLALCMAPYLRKFGKFTVPDFIGDRYYSQAARTVAVVCAIFICFTYIAGQMRGVGVVFS 144

Query: 186 LLFGLEYWVAVVIVGSLMMVYVLFGGMTATTWVQIIKAGLLLGG----ASFMAISVLWH- 240
               +E    V I  +++  Y + GGM   T+ Q+ +  +L+      A F+++ +  H 
Sbjct: 145 RFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFISVMMTGHI 204

Query: 241 ---FGFSPEAMFAGAVKVKTDLALK-DGKTAEVAAGIGQSIMGPGNFVKDPISAISFGMA 296
               GF  E + A        L  K DG +A++  G  Q   G     K  I       A
Sbjct: 205 LPQLGFGAELVDAAGNNTGVYLLEKLDGLSAQL--GFSQYTEGS----KGMIDVFFITGA 258

Query: 297 LMFGTAGLPHILMRFFTVPSAKEARKSVMWATGWIGYFY-LLTFIIGFGAITFV------ 349
           LMFGTAGLPH+++RFFTVP  K+AR S  WA  +I   Y  +  +  F  +  +      
Sbjct: 259 LMFGTAGLPHVIVRFFTVPKVKDARVSAGWALVFIAIMYTTIPALAAFSRVNMIETINGP 318

Query: 350 -------LTNPDFL---DAKGLLK--GGGNMAAIHLANAVGGNV---------------- 381
                   T PD++   +  GL+K     N   I+ A      +                
Sbjct: 319 ESTGVAYETAPDWIKNWEKTGLIKWDDKNNDGKIYYAKGETNEMKIDRDIMVLATPEIAN 378

Query: 382 ----FLGFISAVAFATILAVVAGLTLSGASAVSHDLYATVIRKGDAGSAAELRVSRITTL 437
                +  ++A   A  L+  AGL L  +++VSHDL        D     EL  +RI   
Sbjct: 379 LPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDLLKKNFMP-DISDKQELLYARIAA- 436

Query: 438 ALGALAVLLGIVFEKQNIAFMVSLAFAIAASANFPVLFMSVLWKGCTTRGAVIGGFLGLI 497
           ALG +      +     +A +V++AF +AAS+ FP + M +  +     GA+ G  +GL+
Sbjct: 437 ALGIVMAGYFGINPPGFVAAVVAIAFGLAASSLFPAIIMGIFSRTMNKEGAIAGMVIGLL 496

Query: 498 SS 499
            S
Sbjct: 497 FS 498