Pairwise Alignments

Query, 308 a.a., Deacetylases, including yeast histone deacetylase and acetoin utilization protein from Variovorax sp. SCN45

Subject, 305 a.a., Histone deacetylase superfamily from Pseudomonas syringae pv. syringae B728a

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 19/285 (6%)

Query: 15  DMGAGHPESPERLSAIHDRLLIAGLLDYMAPYDAPLATQAQLARAHTMSHVRELIA--MA 72
           D  A H    ++   + D L+ +GL   +      L     LA AH  S++   ++  ++
Sbjct: 14  DFPADHRFPMDKFRLLRDYLIDSGLTSDVQLMRPELCPADILALAHDPSYISRYLSGDLS 73

Query: 73  PAEGLRFVDPDTRMNPHTLQAALRAAGAAVLATDLVLAGEAPTAFCNVRPPGHHATRDAA 132
             +  R   P    +    +  +RA G ++L  +  L        C++    HHA  D  
Sbjct: 74  REDQRRLGLP---WSEALARRTIRAVGGSLLTAEQALKHGLA---CHLAGGTHHAHYDYP 127

Query: 133 MGFCFFNNVAVGIRHALDVHGLKRVARIDFDVHHGNGSADIFRDDGRVLMCSIFEKGLYP 192
            GFC FN++AV  ++ L    + +V   D DVH G+G+A I  D    +  S+  +  +P
Sbjct: 128 AGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTEDAITVSLHCEKNFP 187

Query: 193 FAGEDDDGPRMVNIGLPSRSGGDAFRAAVTHHWLPALEAFAPQLVYVSAGFDGHREDDMG 252
                 D     +I LP   G   +   V       L  + P LV   AG D H++D +G
Sbjct: 188 ARKAQSDW----DIPLPMGMGDADYLNVVDDLLNYLLPLYKPDLVLYDAGVDVHKDDALG 243

Query: 253 NLGLVENDYAWVTRKLMDVALRHCGGR---VISSLEGGYALSALA 294
            L L +   A       +  LRHC  R   V+  + GGY+   LA
Sbjct: 244 YLQLTDQGLA----NRDEAVLRHCLSRDIPVMGVIGGGYSKDRLA 284