Pairwise Alignments

Query, 308 a.a., Deacetylases, including yeast histone deacetylase and acetoin utilization protein from Variovorax sp. SCN45

Subject, 342 a.a., Histone deacetylase superfamily (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 94  ALRAAGAAVLATDLVLAGEAPTAFCNVRPPGHHATRDAAMGFCFFNNVAVGIRHALDVHG 153
           A++A      A  L +A  A +AF   RPPGHHA R  A G+C+ NN A+  +   D  G
Sbjct: 127 AVKAGADTAHAGALAVATGAHSAFALCRPPGHHAARALAGGYCYLNNAAIAAQTLRD-QG 185

Query: 154 LKRVARIDFDVHHGNGSADIFRDDGRVLMCSIFEKGL--YP-FAGEDDDGPRMVNIG--- 207
             RVA +D D HHGNG+ +IF + G VL  S+       YP + G  D   R    G   
Sbjct: 186 AGRVAILDVDYHHGNGTQEIFYERGDVLFVSLHADPAFGYPYYTGYGDQSGRGAGEGTTL 245

Query: 208 -LPSRSG-GDAFRAAVTHHWLPALEAFAPQLVYVSAGFDGHREDDMGNLGLVENDYAWVT 265
            LP  +G  +A   A   H L  L  FAP  V VS G D    D + +  +    +  + 
Sbjct: 246 NLPLAAGTTEAEWLAALEHGLARLGEFAPDAVVVSLGVDTWAGDPLSHFKVSARAFPALG 305

Query: 266 RKLMDVALRHCGGRVISSLEGGYALSALARS 296
            +L  + L       +  +EGGYA + L ++
Sbjct: 306 ARLAGLGL-----PTLFVMEGGYATAELGKN 331