Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 92/351 (26%), Positives = 147/351 (41%), Gaps = 33/351 (9%)

Query: 11  IKDVAREAGVSPTTVSHALNARGQVDAETRARVEKAALTLGYRPNRNAQRLRTGEAHMIV 70
           IKDVA  AGV+ +TVS  +N  G+   ETR +VE+A   L YRP+  A+ L T  ++M+ 
Sbjct: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63

Query: 71  LLSSMPFAVAGGPSRLGFLMEVAAVAAAAALDRRLALVLAPPMETGRVPMDLLD------ 124
           LL +            GF  E+              L+ A    + +   + +       
Sbjct: 64  LLVTYYTG--------GFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLR 115

Query: 125 VDGALVIEPSAGDPNMAYLLRRGLPVVAIGKPAEEAADAPALPPYVDIHSGHTTRLLLEH 184
            DG ++      D ++  L ++  P V + +      +       +       +++++E+
Sbjct: 116 CDGYVLHSRYLSDDDLRALAQQPTPFVLLDRYVAGLEER-----CITFDHRGASQIVVEY 170

Query: 185 LQAQGARKIAMILGSARRNSYVEGQAAYLAFAAAHGQAPLMSLVDEVK-GESGGREAALT 243
           L  QG RKIA I G   R++    Q  YL   A  G  P  SL +E   G   G  A   
Sbjct: 171 LIQQGHRKIACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQ 230

Query: 244 LLAEHPDIDAFCVPVDAFATGAVAAVLESGRRIPEDVMIATRYDGV-RARTCVPPLTAVD 302
           L A HP+I A     +   TGA+  + E G  +P  + I + +D V    +  P +TAV 
Sbjct: 231 LFARHPEITAVFSCSEEMTTGALQYLHEQGIAVPGRISIVS-FDSVDLCESLYPTVTAVH 289

Query: 303 LHLDEVAQQAIALLF-----------DHLRGDTSRRRVDGPAAQLVPRLSS 342
             + E+A+ A+  L               R    +R  D P +++  R  S
Sbjct: 290 FPISEMARAAVQSLIAMVKQQPTVGPQSFRPILKKRHADQPLSKIAERQDS 340