Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 334 a.a., smc22-r protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 105/342 (30%), Positives = 147/342 (42%), Gaps = 32/342 (9%)

Query: 10  TIKDVAREAGVSPTTVSHALNARGQVDAETRARVEKAALTLGYRPNRNAQRLRTGEAHMI 69
           TI  VA+ AGVS TTVSH LN   +V AE R RVE A   LGY PN  AQ LRTG  +++
Sbjct: 3   TIAKVAKRAGVSLTTVSHVLNHADRVSAEMRRRVEVAIAELGYVPNPQAQSLRTGRTNLV 62

Query: 70  VLLSSMPFAVAGGPSRLGFLMEVAAVA----AAAALDRRLALVLAPPMETGRVPMDLL-- 123
            +L            R  F  E+   A     A  LD  +     P   +       L  
Sbjct: 63  AMLIP--------DIRNPFYPELVKAAQSDLQAMGLDLLIFNTDVPGGHSQEHSRQYLRH 114

Query: 124 ----DVDGALVIEPSAGDPNMAYLLRRGLPVVAIGKPAEEAADAPALPPYVDIHSGHTTR 179
                +DG +V + +  D + A L+   +P V IG     A D+  +    D   G+   
Sbjct: 115 IRNRRIDGLIVGDFALHDMHDA-LIGIDVPTVFIGDLPNAAVDSVKID---DFGGGYQ-- 168

Query: 180 LLLEHLQAQGARKIAMILGSARRNSYVEGQAAYLAFAAAHGQAPLMSLVDEVKGES-GGR 238
            +  +L  +G ++IA + G +     +   A +      HG  PL  L  E    S  GR
Sbjct: 169 -MGAYLAKRGHKRIAHVTGPSFFAEAMARAAGFEQGLRDHGVEPLAELRREGTYLSPSGR 227

Query: 239 EAALTLLAEHPDIDAFCVPVDAF--ATGAVAAVLESGRRIPEDVMIATRYDGVRARTCVP 296
           EA   LLA   D     V    F  A GA+A   + G RIP+DV IA   D  +     P
Sbjct: 228 EAVEWLLATSGDHLPSVVFFGNFLMAAGAIAEFHDRGVRIPDDVSIAVFGDQPQLEYVRP 287

Query: 297 PLTAVDLHLDEVAQQAIALLFDHLRGDTSRRRVDGPAAQLVP 338
            +  V      +A +A A+L + L G+ S      P ++++P
Sbjct: 288 RIARVGNTPSLLAHRATAMLLERLSGEYS----GSPRSEVIP 325