Pairwise Alignments

Query, 346 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 22/331 (6%)

Query: 11  IKDVAREAGVSPTTVSHALNARGQVDAETRARVEKAALTLGYRPNRNAQRLRTGEAHMIV 70
           IK V+  AGVS  TVS  L +  +V  +TRA+V +A    GYRPN  A  ++TG+++ IV
Sbjct: 4   IKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSNAIV 63

Query: 71  LLSSMPFAVAGGPSRLGFLMEVAAVAAAAALDRRLALVLAPPM-----ETGRVPMDLLD- 124
           +L  +P  V        F M +      AA ++   ++L         E     M L + 
Sbjct: 64  VL--VPNLVN------PFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTNR 115

Query: 125 VDGALVIEPSAGDPNMAYLLRRGLPVVAIGKPAEEAADAPALPPYVDIHSGHTTRLLLEH 184
            DG + ++ S    +    L   +P+V++     E  +     P++++ +    R L  H
Sbjct: 116 ADGLIQLDHSFPFSDNDADLAATIPMVSVC----ERIEGDRKYPFIELDNHAAGRALAHH 171

Query: 185 LQAQGARKIAMILGSARRNSYVEGQAAYLAFAAAHG-QAPLMSLVDEVKGESGGREAALT 243
           L   G +   +I G  R   + +     ++     G       LV        G E A  
Sbjct: 172 LIGFGHKHFGIIAGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVGSSYSIETGIEGARE 231

Query: 244 LLAEHPDIDAFCVPVDAFATGAVAAVLESGRRIPEDVMIATRYDGVRARTCV-PPLTAVD 302
           LL+ +P   A     D  A GA+  +   G +IP+D+ + T +D V+    + PPLT +D
Sbjct: 232 LLSRNPRPSAIFCFNDDIAIGAMFEIKSQGLKIPDDISV-TGFDNVKVSAYMDPPLTTID 290

Query: 303 LHLDEVAQQAIALLFDHL-RGDTSRRRVDGP 332
               E+ + A+ +L   + R   +R RV  P
Sbjct: 291 QPAYEMGRNAVEVLVQQINRLPLARSRVIMP 321