Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 2e-49
 Identities = 102/297 (34%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 3   IENISDLQVLVHTARGGTLTAAAHALGITPAAASATLKRLEAQLGARLFERSTRAMRLTP 62
           ++  +D+ +     +   L AA   L ++PA  +A L+ LE + G +L  RSTR + LT 
Sbjct: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60

Query: 63  QGQTLLDYAVRAFELLDEGESLVTADRGELVGTLRVASPSDLTRSTLLPWFDEFLALHPG 122
            G       +     + E E+L+     E+ GTL+V++P D+ +  + P    F   +P 
Sbjct: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120

Query: 123 VQLSLSVGDRPLDVMRDEVDVALRYGALADSRLVARAFALTNPLLTASPAYLLRHPAPKV 182
           V   L + D   ++    +DV +RYG LADS L++R  A +  +L ASPAYL R   PK 
Sbjct: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180

Query: 183 PQDLAHHNCLIFNRSGRRHRVWRFGQNGQWTEVRVNGNRSVDDASLAREWTVAGHGISLK 242
           PQDLA H+CL   RS    + W F +N Q   + V      DD  + R+W +AG GI+LK
Sbjct: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240

Query: 243 SALDVREDIREGRLVRLLPDW--------ETEPYPLHALLPSGRFVPARVRAFVDFL 291
           S LDV++D+ + RLV +L  +              L+ L  S ++ P R+R F+DFL
Sbjct: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFL 297