Pairwise Alignments

Query, 320 a.a., DnaJ-class molecular chaperone CbpA from Variovorax sp. SCN45

Subject, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (362), Expect = 4e-39
 Identities = 109/352 (30%), Positives = 161/352 (45%), Gaps = 78/352 (22%)

Query: 1   MEFKDYYSALGIDRTASDDEVRKAYRKLARKYHPDV-SKEPDAEQRMRDINEAKDVLGDK 59
           M  +D+Y  LG+ R AS+ +++KAY++LA KYHPD  S +  A ++ +++ EA ++L D 
Sbjct: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60

Query: 60  EKRAAYDALAERVARGGSPDGHFQPPPGWDEGFEFRRGPNQGPADHAD-FSEFFSSLFGE 118
           +K+AAYD         G+         G+  G     G   G AD  D F + F  +FG 
Sbjct: 61  QKKAAYDQYGHAAFEQGAG--------GFGGG-----GFGGGGADFGDIFGDVFGDIFGG 107

Query: 119 AERRGAARQNYKARGEDHHAAIEIALE------------------DALKGAEREITLRAQ 160
             R G  R     RG D    +E++LE                  DA  G+  +    AQ
Sbjct: 108 GRRGGGPRAQ---RGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQ 164

Query: 161 TVDA-QGHPQWENR-------------------------------------TLSVKIPPG 182
           T     GH Q + R                                     TL+VKIP G
Sbjct: 165 TCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAG 224

Query: 183 VHPGQFIRLAGQGMPGHGGEPPGDLYLEVRIAPHRLYRVEERDLYMPLPVTPAEAALGAQ 242
           V  G  IRL+G+G  G  G P GDLY++V +  H ++  +  +LY  +PV+ A AALG +
Sbjct: 225 VDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGE 284

Query: 243 VQVPTPTGGVVEVTVPRNARGGMKLRLKGRGLAG---KTPGDLYLLIEIALP 291
           V+VPT   G V + VP   + G   R++G+G+ G      GDL + + +  P
Sbjct: 285 VEVPT-LDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETP 335