Pairwise Alignments

Query, 451 a.a., NADH dehydrogenase (EC 1.6.99.3) from Variovorax sp. SCN45

Subject, 409 a.a., ferredoxin reductase from Sinorhizobium meliloti 1021

 Score = 67.4 bits (163), Expect = 8e-16
 Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 51/287 (17%)

Query: 15  IVIVGCGFGGLEAARKLQHADV--DVTVIDKTNHHLFQ--PLLYQVATAGLAAPSIAAPV 70
           IVI+G G  G  AA  L+      ++T+     H  ++  PL    +  GLA  S+   +
Sbjct: 4   IVIIGAGECGARAAFALREKGFGGEITLTGAEPHLPYERPPL----SKDGLAQASLPKFI 59

Query: 71  RALFR-KQPRITTLLGEVT-GIDPAARMVQLANGDSVPYDHLIVAAGATHSYFGN-DQWA 127
               R ++ RIT L G     ID   + V L++G S+ YD L++A GA    F    + A
Sbjct: 60  AGAARYEEARITVLTGVTAESIDRVHKAVTLSDGVSLDYDRLLLATGARPRAFPRVPENA 119

Query: 128 PIAPGLKTLADAFEIRRRVLLSFETAEITTDPERRRALLTFVVIGAGPTGVEMAGTLAEI 187
                L+T ADA  IR  +            P  R A     VIG G  G+E+A T  ++
Sbjct: 120 GRIRTLRTHADALAIRGALT-----------PGARLA-----VIGGGFIGLELAATARKL 163

Query: 188 AKHTLSGEFRHIDPASAQVLLVEGGPRVL-QAMPESLSQKALEQLEKLGVEVRLNARVTA 246
                           A+V+LVEG PRVL + +PE ++    E+  + GVE+   A++ A
Sbjct: 164 G---------------AEVVLVEGLPRVLSRGVPEEIAVLVAERHRREGVEIICGAQIAA 208

Query: 247 IDPTGLEVQTGGGADGAPAASYRIDSSCVVWAAGVAASPLGRMLGAA 293
           ID        G GA    A    I++  +V   G+ A P   +  AA
Sbjct: 209 ID------GAGDGARLLLADGVDIEADLIV--VGIGAVPNTELAEAA 247



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 14/106 (13%)

Query: 14  RIVIVGCGFGGLEAARKLQHADVDVTVIDKTNHHLFQPLLYQVATAGLAAPSIAAPVRAL 73
           R+ ++G GF GLE A   +    +V +++          L +V + G+    IA  V   
Sbjct: 143 RLAVIGGGFIGLELAATARKLGAEVVLVEG---------LPRVLSRGV-PEEIAVLVAER 192

Query: 74  FRKQPRITTLLGEVTGIDPA---ARMVQLANGDSVPYDHLIVAAGA 116
            R++        ++  ID A   AR++ LA+G  +  D ++V  GA
Sbjct: 193 HRREGVEIICGAQIAAIDGAGDGARLL-LADGVDIEADLIVVGIGA 237