Pairwise Alignments

Query, 160 a.a., no description from Variovorax sp. SCN45

Subject, 693 a.a., Sel1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 24  KALSLFLKAAAAGETHALNSVGYFLDHGIGVKKNPAAARDWYRKAAKAGDVAGCANLAIC 83
           KALS F +AA  G   A   VG     G+G +KN   A  +  K+A    +A      I 
Sbjct: 385 KALSFFQQAADLGLERAYFEVGKAYHLGLGTEKNDQLALPYLLKSANNNSLATHYLGVIY 444

Query: 84  YRD---EGNFRWARFWFEKAYAQGDGDAALELGRLFLWEGPNQN 124
           Y+    E +   A  +FEKAY+QG+ D    LG+++ +  P+ +
Sbjct: 445 YKSDLIEHDIDKAITYFEKAYSQGEIDPTASLGQIYEFGSPSHH 488



 Score = 40.4 bits (93), Expect = 6e-08
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 25  ALSLFLKAAAAGETHALNSVGYFLDHGIGVKKNPAAARDWYRKAAKAGDVAGCANLAICY 84
           AL L+  AA      ALN++     +G  V++N     + + KAA   +     NL I Y
Sbjct: 314 ALQLYQLAAQQNNALALNNMASIYFNGEYVERNTELGLELFNKAATMNNTQALYNLGIIY 373

Query: 85  RDEGNFRWAR----FWFEKAYAQGDGDAALELGRLF-LWEGPNQNRHKVVDYLGKAMASP 139
           RD    +  R     +F++A   G   A  E+G+ + L  G  +N    + YL K+  + 
Sbjct: 374 RDGNTVKRDRAKALSFFQQAADLGLERAYFEVGKAYHLGLGTEKNDQLALPYLLKSANNN 433

Query: 140 SITSN 144
           S+ ++
Sbjct: 434 SLATH 438



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 17  WDAGA------HKKALSLFLKAAAAGETHALNSVGYFLDHGIGVKKNPAAARDWYRKAAK 70
           +D GA      ++ A   +LKAA   +T AL ++  F  +G  V+++   A D+YR+A  
Sbjct: 88  YDVGALGTKEDNELAFKWYLKAAKQKDTQALINLAAFYRNGEFVEQDLDQAIDYYRQAIS 147

Query: 71  AGDVAGCANLAICYRDE 87
             D      L   Y DE
Sbjct: 148 LNDPIAFCELGFLYLDE 164



 Score = 31.2 bits (69), Expect = 4e-05
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 18/99 (18%)

Query: 9   WFLAANDAWDAGAHKKALSLFLKAAA--------------AGETHALNSVGYFL---DHG 51
           W+  A DA DA A     +L+    A              A E +  ++ GY     D G
Sbjct: 209 WYQLAADAGDASAQYNLATLYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFG 268

Query: 52  IGVKKNPAAARDWYRKAAKAGDVAGCANLAICYRDEGNF 90
             V+++   A   Y++AA+ GD     NLA  + + G F
Sbjct: 269 WFVEQDKKLAIQLYQRAAELGDAGSMVNLATFF-ESGQF 306



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 40/133 (30%)

Query: 24  KALSLFLKAAAAGETHALNSVGYFLDHGIGVKKNPAAARDWYRKAAKAGDVAGCANLAIC 83
           KA++ F KA + GE     S+G   + G     +   A  WY+K  K         LA+ 
Sbjct: 456 KAITYFEKAYSQGEIDPTASLGQIYEFGSPSHHDVDLAIAWYKKGIKGEHPYAYMRLALL 515

Query: 84  YRD-EG---------------------------------------NFRWARFWFEKAYAQ 103
           Y + EG                                       +++ AR+++E A  Q
Sbjct: 516 YMNGEGVAKNMQHGLELYSTYCKLRKYNENMKLGNLFFFGNQIKQDYQQARYFYELALKQ 575

Query: 104 GDGDAALELGRLF 116
            D  AA  LG ++
Sbjct: 576 QDSTAANNLGEMY 588



 Score = 27.3 bits (59), Expect = 5e-04
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 64  WYRKAAKAGDVAGCANLAICYRD----EGNFRWARFWFEKAYAQGDGDAALELGRLF 116
           WY+ AA AGD +   NLA  Y D    E + +    + + A  Q  G A   L  ++
Sbjct: 209 WYQLAADAGDASAQYNLATLYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMY 265