Pairwise Alignments

Query, 220 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 233 a.a., amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  118 bits (295), Expect = 1e-31
 Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 21/226 (9%)

Query: 1   MNIEFDFGAVLS----EWPLLLRGVAWTIGLTAVGTVLGMIVGTFCAWARANGP---AWL 53
           M   FD+  VLS    +W  +++GV  T  L+ +  VL M++GT  A  R +G     W 
Sbjct: 1   MQYTFDWNLVLSGERLDW--IVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWF 58

Query: 54  RIVVGTYVELIRNTPFIVQLFFIFFG----LPAAG----VKLSPEVAS-VIAMVLNLGAY 104
            +    + E  RNTP +VQ+FF +FG    LP A      K + E A+ VI++ +   A+
Sbjct: 59  SVA---FTEFFRNTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAF 115

Query: 105 STEIIRAGIEATPKGQIEAAVSLALSKSQVFLRVVLPPALKKVWPAMVSQIVIVMLGSAV 164
             E IR+GI + P+ Q+EA+ +  LS  Q    VVLP A + + P ++SQ + +   S++
Sbjct: 116 IAEEIRSGIFSIPRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSL 175

Query: 165 CGQISTEELSYAANLIQSRNFRAFEAFIVATLIYLALSVALRRLLD 210
           C  I   EL+Y A  I+S  F  FEAF V+TLIYL +S+ +  L++
Sbjct: 176 CMTIGVMELTYMARQIESYTFHGFEAFTVSTLIYLCISLMVSLLIN 221