Pairwise Alignments

Query, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 2e-30
 Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 12/190 (6%)

Query: 32  GIVGALLLFLRLRGGRFANRAV-----GLYVQLFQGTPLLMQLFLAYFGIA-----LFGI 81
           G+V AL+L L L   R     V      LY+  F+GTPLL+QLFL Y+G+      L G+
Sbjct: 29  GLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQVFPLLVGL 88

Query: 82  DVSAWTAASVALTLYTSAFLAEIWRGCVASIPKGQWEASGSLALSFGEQMRHVILPQAVK 141
           D  A++AA + LTL+ +A++AE  R  +  I + Q EAS S+ ++  + MR +ILPQA +
Sbjct: 89  D--AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATR 146

Query: 142 IAIAPTVGFLVQVIKGTALASVIGFVELTKAGSMISNATFKPFVVFSCVALLYFVLCFPV 201
           +A+   + + + +IK T+LA  +G  E+     M ++++F+ F  F  VAL+Y+V+   +
Sbjct: 147 VALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVL 206

Query: 202 SLYAKTLERK 211
           +      E+K
Sbjct: 207 TRLQSWAEQK 216