Pairwise Alignments

Query, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  127 bits (320), Expect = 1e-34
 Identities = 69/215 (32%), Positives = 130/215 (60%), Gaps = 1/215 (0%)

Query: 1   MADFSLWDILRNLLMALRWTVVLSLIAFVGGGIVGALLLFLR-LRGGRFANRAVGLYVQL 59
           M  + ++D +  ++ A+  T+ +++++F+   I+  L+   R +   +  +  +  YV++
Sbjct: 1   MKFYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEV 60

Query: 60  FQGTPLLMQLFLAYFGIALFGIDVSAWTAASVALTLYTSAFLAEIWRGCVASIPKGQWEA 119
           F+GTPLL+QLF  Y+G+   GI +S+  AA + L+L   A+++EI R  + S+P GQ+EA
Sbjct: 61  FRGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEA 120

Query: 120 SGSLALSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSMISNA 179
           + SL +   E M +++LPQA +I I P V     ++K ++L SV+   ELT+ G +I   
Sbjct: 121 AESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTR 180

Query: 180 TFKPFVVFSCVALLYFVLCFPVSLYAKTLERKTHG 214
           T +PF ++  + L+Y +L   +S+ +  +E+K +G
Sbjct: 181 TSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLNG 215