Pairwise Alignments

Query, 459 a.a., TRAP transporter solute receptor, TAXI family precursor from Variovorax sp. SCN45

Subject, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 29/202 (14%)

Query: 49  LATGPTGSAYAQFGKHYAEALKRAGIEVELKPT----------SGSTENLQLLRTGGADV 98
           LAT  TG  Y   G   A   K     V+L P+          +GS EN++L+    A  
Sbjct: 33  LATASTGGTYYPVGVALATLTK-----VKLTPSYHFSLSAISSAGSGENVKLMNDNEAQF 87

Query: 99  GFVRG-------GSADPVADEEAGLTSLGSLFFEPIWLFYRADSAQKIDKKTGTLTSLTQ 151
             ++G           P A+ +  L S+  L+        R+D A      TGT+  L  
Sbjct: 88  AILQGLYGAWAWAGEGPYAERQNQLRSVSMLWQNVEHFIVRSDLAP-----TGTIADLAS 142

Query: 152 LRGLRVNVDLPGSGLPDIMERMLKANRLGPDDLLLSNLEQAAAAEALQAGLLDAI-VLSS 210
           ++G + ++    SG      +++K   + PD   L+ L    +A ALQ G +D +   + 
Sbjct: 143 MKGKKFSIGSKNSGTEFSGRQIMKGVGVDPDTFNLAYLGYGGSASALQNGTIDGMNTPAG 202

Query: 211 APQSPQVQ-HLLRSDDIKLMDF 231
            P     Q      +DIK++ F
Sbjct: 203 VPVGAVTQAFAAMGNDIKILSF 224