Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 320 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 4e-27
 Identities = 54/184 (29%), Positives = 107/184 (58%), Gaps = 1/184 (0%)

Query: 71  DPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIVAAIFILPWAMPSIPTIL 130
           DP ++ +V NT+ F +V++ ++M++ L+++    +      +V A+ ++PWA+P+I +  
Sbjct: 89  DPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVKFTGRALVRALILIPWAIPTIVSAK 148

Query: 131 SFRFMLNPEWGVINTTIFRLTGADGP-NWLNDPTLALGFAMVVHIWKSLPFWTLILVAGR 189
            + +MLN ++G+IN  +  L   D P  W  D  L++   ++V +WK++PF TL+++A  
Sbjct: 149 IWSWMLNDQFGIINHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFVTLLMLAAL 208

Query: 190 LAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTGGGP 249
             +P + YEAA VDG    + F  V+ P L    + + I  ++ +L  F+ +Y+LT    
Sbjct: 209 QMLPSDCYEAARVDGIHPVRVFWRVTLPLLMPALLVAAIFRILDSLRVFDVIYVLTSNSS 268

Query: 250 ADLT 253
           + ++
Sbjct: 269 STMS 272