Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 24/264 (9%)

Query: 11  AAATTAAPVANPGARHARWQFW-----GAVMVVPYLLVFVVFVLYPVGYGLWLA------ 59
           A A      + P A+    + W     G + ++P+L+ F    L P    L+L+      
Sbjct: 5   AVAVGTGASSRPAAQGRLARIWASHGAGYMFLLPWLIGFFGLTLGPAIASLYLSFTNFDL 64

Query: 60  -RHPQ-----SYVKLVE-DPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKI 112
            R P+     +Y ++   DP F  +V  T +++++++  K+  AL+++         + +
Sbjct: 65  IRAPEWIGTANYARIATADPKFAAAVKVTFLYVVLSVPFKLAFALLVAILLDRGVRGLTV 124

Query: 113 VAAIFILPWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGADGPNWLNDPTLALGFAMVV 172
             AIF LP  +     I      L    G+IN+ + +  G +GP+W++ P  ++   +V+
Sbjct: 125 YRAIFYLPSLLGGSVAIAVLWRQLFAGDGLINSLLAQF-GIEGPSWISHPDYSIWTLVVL 183

Query: 173 HIWK-SLPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSM 231
            +W+   P   +I +AG   IP + YEAAS+DGAS +++F  ++ P L  +   + ++  
Sbjct: 184 SVWQFGSPM--IIFLAGLRQIPTDMYEAASLDGASKFRQFYKITLPLLTPVIFFNAVVQT 241

Query: 232 IWTLGDFNSVYLLTG--GGPADLT 253
           I     F   ++++G  GGP + T
Sbjct: 242 IDAFKAFTPAFIISGGTGGPINST 265