Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 312 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 3e-30
 Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 15/264 (5%)

Query: 39  PYLLVFVVFVLYPVGYGLWLARH-------PQSYVKLVEDPIFF------RSVINTVVFL 85
           P LL+F VFV+ P+G   W + +       P  +V L    + F      R++IN  + +
Sbjct: 40  PALLLFTVFVILPMGEAAWYSLYRWNGYGTPTQFVGLRNFEVLFNNAAFSRALINNGIII 99

Query: 86  IVAINVKMLVALVLSGFFVISRWWIKIVAAIFILPWAMPSIPTILSFRFMLNPEWGVINT 145
           +V++ +++ +AL L+         +     IF LP+ +  +   L +RF+ + ++G++  
Sbjct: 100 LVSVLLQIPLALWLAMMLAHRIAGVVAFRLIFFLPYVLADVAAGLIWRFVYDGDYGLV-A 158

Query: 146 TIFRLTGADGPNWLNDPTLALGFAMVVHIWKSLPFWTLILVAGRLAIPGEQYEAASVDGA 205
            I    G   P  L D +LA+   + V IWK   F  ++ +AG  A+     EAA +DGA
Sbjct: 159 AIAGFFGVATPYVLADRSLAIYAVLAVIIWKYFGFHMMLFIAGLQAVDRSVLEAAEIDGA 218

Query: 206 SSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTGGGPADLTHVLATLGIRY-L 264
           + WQKFR+V+ P L +    S+  ++I +L  F+ V  LTGGGP++ T  + T    Y +
Sbjct: 219 TGWQKFRYVTLPLLGSTVRLSIFFAVIGSLQLFDLVMPLTGGGPSNSTQTMVTFLYTYGV 278

Query: 265 RLDQVDLSMASIVVALPLILPLVY 288
              QV L  A  VV   + + L +
Sbjct: 279 TRMQVGLGSAVGVVLFVICVTLAF 302