Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 307 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 25/248 (10%)

Query: 25  RHARWQFWGAVMVVPYLLVFVVFVLYPVGYGLWLARHPQ------------SYVKLVEDP 72
           R  RW     ++++P  ++F V +L      LW++ H              +Y +L+ DP
Sbjct: 6   RRHRWWLTPTLLILPGAILFAVVILASSVQSLWISLHDWDGFGPMIWIGLGNYRELINDP 65

Query: 73  IFFRSVINTVVFLIV---AINVKMLVALVLSGFFVISRWWIKIVAAIFILPWAMPSIPTI 129
            F+ S+ N +++L++   A  + + +AL+++          KI     ++P  + S+   
Sbjct: 66  QFYVSLKNNLIWLVMFMLAPPIGLAIALLVNQ---------KIKGMRVVIPLVLASVAVG 116

Query: 130 LSFRFMLNPEWGVINTTIFRLTGADGPNWLNDPTLALGFAMVVHIWKSLPFWTLILVAGR 189
           + F ++  PE+G++   IFR  GA+ P  L+D  L     ++  +W  + F  ++ +AG 
Sbjct: 117 VVFTWVYTPEFGLL-ALIFRAFGANAPALLSDEHLVTFAIVIAALWPQIAFCMVLYLAGL 175

Query: 190 LAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTGGGP 249
             +  E   A  VDGA  W   R +  P L  +   ++ ++++  L  F+ + ++T GGP
Sbjct: 176 NNLSEELIGAGRVDGARGWNMLRHIVLPQLTQVTFIAIAVTVVGALRSFDMISVMTRGGP 235

Query: 250 ADLTHVLA 257
              + VLA
Sbjct: 236 FGSSSVLA 243