Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 67/282 (23%), Positives = 135/282 (47%), Gaps = 24/282 (8%)

Query: 33  GAVMVVPYLLVFVVFVLYPVGYGLWLARHP-----------QSYVKLVEDPIFFRSVINT 81
           G + V P L +  +F++YP+ + LW++               + V+L  DP+F +++ NT
Sbjct: 16  GWLFVAPALGLITLFMVYPIAWSLWMSFQSGRGMTLKFAGFANIVRLWNDPVFIKALTNT 75

Query: 82  VVFLIVAINVKMLVALVLSGFFVISRWWIKIVAAIFILPWAMPSIPTILSFRFMLNPEW- 140
           + + +V + + +L+AL+L+      R    +   +F     +P + +++++  +    + 
Sbjct: 76  MTYFVVQVPIMILLALILASLLNNPRL---VGRGVFRTAIFLPCVSSLVAYSVLFKGMFA 132

Query: 141 --GVINTTIFRLTGADGP-NWLNDPTLALGFAMVVHIWKSLPFWTLILVAGRLAIPGEQY 197
             G++N+T+  +  A  P  WL  P  A    ++   W+   +  +  +A    I    Y
Sbjct: 133 TDGIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIY 192

Query: 198 EAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLT--GGGPADLTHV 255
           E A +DG  +W +   ++ P LK + + + ++S I TL  F+ VY LT   GGP++ T  
Sbjct: 193 EVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLT 252

Query: 256 LA----TLGIRYLRLDQVDLSMASIVVALPLILPLVYFMMKR 293
           L+     L  R++       +++ ++V L  +L  V F   R
Sbjct: 253 LSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQFFAAR 294