Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 319 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 5e-28
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 20/263 (7%)

Query: 8   SNPAAATTAAPVANPGARHARWQFWGAVMVVPYLLVFVVFVLYPVGYGL------WLARH 61
           + P A       AN G   A + F     + P++L F+ F L P+ + L      W    
Sbjct: 7   TGPKAEVVRRRRANAGRHLAPFLF-----ISPWILGFLFFTLGPLCFSLTMSFFDWPVVG 61

Query: 62  PQSYVKL-------VEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIVA 114
            +++V L       +EDP F  S+  TV F  + +   ++++ +L+     + +      
Sbjct: 62  ERTFVGLDNYRSMFMEDPQFRESLWITVKFAAIYVPFNIVMSFLLALLLHHATFASGFFR 121

Query: 115 AIFILPWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGADGPNWLNDPTLALGFAMVVHI 174
            +F LP  +  +  +  + ++ + E+G++N  +  L G DGPNWL DP+LAL   +V  +
Sbjct: 122 TVFYLPSVISGVALVTIWSWIYSREYGLLNFML-SLVGIDGPNWLGDPSLALVAIIVASL 180

Query: 175 WKSLPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWT 234
           W  L    LIL+ G  AIP E YEAA+V G   W +  F++ P L  + I + I S+I  
Sbjct: 181 W-GLGGTMLILLTGLKAIPKELYEAATVSGVPGWAQMVFITLPMLGPMLIFTFITSIISA 239

Query: 235 LGDFNSVYLLTGGGPADLTHVLA 257
                   LLT GGP   T+  A
Sbjct: 240 FQQLTIALLLTKGGPLGSTYFFA 262