Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 310 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 1e-42
 Identities = 93/303 (30%), Positives = 162/303 (53%), Gaps = 23/303 (7%)

Query: 1   MSSTVTASNPAAATTAAPVANPGARHARWQFWGAVMVVPYLLVFVVFVLYPVGYGLWLAR 60
           MSS   +  P+  TTA+ + N           G + ++P  +  + F+ YP+G G+WL  
Sbjct: 1   MSSITPSGKPS--TTASLMQNNNVL-------GFLFMLPAAVFLICFLTYPLGLGVWLGF 51

Query: 61  HP------------QSYVKLVEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRW 108
                         ++Y  L  D +F+ SV NT+++  VA  +K ++ L L+     +  
Sbjct: 52  TDTRIGRDGVFIGIENYEFLARDSVFWLSVYNTLLYTFVASILKFVLGLWLALLLNENLP 111

Query: 109 WIKIVAAIFILPWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGADGP-NWLNDPTLALG 167
           +     AI +LPW +P++ + L+F ++ + ++ +I+ ++ +L   DGP N+L DP  A  
Sbjct: 112 FKSFFRAIVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGIIDGPINFLGDPNNARA 171

Query: 168 FAMVVHIWKSLPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSL 227
             +  ++W+ +PF  + L+AG   IP    EAAS+DGA+SWQ+FR+V+ P L  +    +
Sbjct: 172 SVIAANVWRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVM 231

Query: 228 ILSMIWTLGDFNSVYLLTGGGPADLTHVLATLGI-RYLRLDQVDLSMASIVVALPLILPL 286
             S+++T  DF  +Y+LT GGP + TH++ATL   R +   Q+    A  V  +P +L  
Sbjct: 232 TFSVLFTFTDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMIPFLLAA 291

Query: 287 VYF 289
           + F
Sbjct: 292 IMF 294