Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 305 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 27/292 (9%)

Query: 12  AATTAAPVANPGARHARWQFWGAVMVVPYLLVFVVFVLYPVGYGLWLARHP--------- 62
           +A T+A       R A W+  G + + P + +  +F + PV + LW++ H          
Sbjct: 4   SALTSATRRRRPKRQAGWR--GLIYIAPAMALVTLFFVLPVLFTLWMSLHKWPLLGEPAW 61

Query: 63  ---QSYVKLVEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIVAAIFIL 119
              ++Y ++  D  FF ++  T  + ++       VA  L+ F    R  + +   I  L
Sbjct: 62  IGLRNYTRMFTDARFFNALGFTAHYTLIVTIAIFAVAFPLAIFVEKQRPLVSLYRTIVFL 121

Query: 120 PWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGADGP--NWLNDPTLALGFAMVVHIWKS 177
           P  +      L + ++ N + G+    +F + G      N L     A    +V+ +WK 
Sbjct: 122 PVVVGLASASLLWVWLANVDSGLF-APLFDMLGLTSGRINLLAKFDTAFLTIIVMVVWKI 180

Query: 178 LPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGD 237
             F  +IL+ G  AIP E  EAA +DGA  WQ+FR ++ P ++     +LILS+  ++  
Sbjct: 181 AGFTMIILLTGLQAIPAELTEAARIDGAGRWQRFRHLTLPLMRRTMALALILSVTGSILA 240

Query: 238 FNSVYLLTGGGPADLTHVLATLGIRYLRLDQVDLSM-----ASIVVALPLIL 284
           F+  Y++T GGP +       + + Y   +Q  +S      A++ +AL LIL
Sbjct: 241 FDQFYIMTSGGPQN-----KMISVVYYIFNQSFVSFNLGYGAALSIALLLIL 287