Pairwise Alignments

Query, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 4e-26
 Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 34/313 (10%)

Query: 6   TASNPAAATTAAPVANPGARHARWQFWGAVMVVPYLLVFVVFVLYPV------------G 53
           T +  AA    A      A+H  W   G + V+P  L   +F+  P+            G
Sbjct: 3   TIAQSAARRRHAGRTRLSAKHREW-IAGYLFVLPDALGLFIFLGVPMALSLVLSVFEVNG 61

Query: 54  YGLWLARHPQSYVKLVEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIV 113
           +G +     ++Y+++  DP+F++    T ++  + + +  +  L L+     +  +  I+
Sbjct: 62  FGGYSFVGARNYLRMWNDPLFWKGARVTALYAAMLVPLLYVCGLGLALLVQRTDRFNAIM 121

Query: 114 AAIFILPWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGA---DGPNWLNDPTLALGFAM 170
            ++F  P  +  +   L ++FM+  + GV++    RLT A    G + L DP  AL   +
Sbjct: 122 RSMFFAPHMVSLVVVALVWQFMVVDKIGVVS----RLTAALDIGGISLLGDPNFALITIV 177

Query: 171 VVHIWKSLPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILS 230
           +V +W  + F+ LI + G   IP + YEAA +DGA +  +F F++ P LK      +++S
Sbjct: 178 LVSVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIARFWFITLPLLKPTSFFVIMVS 237

Query: 231 MIWTLGD---FNSVYLLTGGGPADLTHVLATLGIRYLRLDQVDL-------SMASIVVAL 280
           M+  +     F+ +Y++T GGPA+ T VL    I Y+              +MASI+V  
Sbjct: 238 MVAAVAGAQAFDIIYVMTKGGPANATSVL----IVYIYQQAFGFGAFGYAAAMASILVVA 293

Query: 281 PLILPLVYFMMKR 293
            +I+  V+F + R
Sbjct: 294 LMIVTAVFFALTR 306