Pairwise Alignments

Query, 473 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (355), Expect = 5e-38
 Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 19/435 (4%)

Query: 17  LLEAPIVPTLLRLAAPNVLVMVAQASVGLIETYFVGKLGTDALAGMALVFPIVMLMQMTS 76
           LL API   L ++  P +  +VA     L++T+F+  LGT ALA ++  FP+   +   +
Sbjct: 19  LLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCIT 78

Query: 77  SGAMGGGIASSIARALGARRRADADALVWHAIVIALGFGLCFTLALLLGGRWLYGIMGGT 136
            G +G G+++ I R LG      A  +  H +++AL      +   LL    L+ ++G +
Sbjct: 79  MG-IGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGAS 137

Query: 137 GPALEAALTYS-HWVFSGAVLVWLFNSLSAIIRGTGNMSVPANVTVVGVVFLIPASPLLI 195
              +     Y   W  +  +LV      SA IR TG+   PA + ++  +      PLLI
Sbjct: 138 HELIPLIKEYMVVWYLTIPLLVLPMAGNSA-IRATGDTKTPAKIMMLAGLINGALDPLLI 196

Query: 196 FGIGPLPGMGIAGGAMALLLYY---LLGSIALIVYLRSPRSLLRPTLAALKLRWPLFRDI 252
           FG GP P +GI G A+A    +   L+GS+ L++  +  + L  P+L  L+  W   + I
Sbjct: 197 FGYGPFPELGIQGAAIASAFSWLGALIGSLYLLI--KREKLLAIPSLPHLRDDW---QQI 251

Query: 253 LRIGLVGAVSTVATNLSIGIATALTGHFGSGALAGYGTASRLEYLLVPLVFGLGAPLVAM 312
           L+IG   A+ST    +S  +   +    G+ A+A YG   R+E +L+ ++  L + L   
Sbjct: 252 LKIGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPF 311

Query: 313 VGTCMGAGQRERALRATWAGAALAFALTETIGLAAALFPRPWLLLFGNDPAMLETGAHYL 372
           +   +GA    R+    +     +      + +       P   LF  + A+ +   HYL
Sbjct: 312 MAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYL 371

Query: 373 RVVGPLYGFFGVGLVLYFASQGAGRLLWPVLGNIARLAVAGTGGWLALRWGGG----LTG 428
            VV   YGF GV ++L  A     + L     +  RL V      L   W GG    + G
Sbjct: 372 LVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVF----TLPAAWIGGRLYNIEG 427

Query: 429 VFAAQGVALVVYGIV 443
           +F    V  ++ G++
Sbjct: 428 LFIGIAVGNILGGLL 442