Pairwise Alignments

Query, 175 a.a., KEGG: 2'-5' RNA ligase from Variovorax sp. SCN45

Subject, 173 a.a., 2'-5' RNA ligase from Pseudomonas stutzeri RCH2

 Score = 42.7 bits (99), Expect = 3e-09
 Identities = 55/184 (29%), Positives = 72/184 (39%), Gaps = 24/184 (13%)

Query: 1   MTESRQLLIGLFPTEPVQAA-IHAHRQDWWWPKRCSFPPQERLHLTLQYLDDQQGDAERH 59
           M+E    L    P  P QAA I A R D     R    P++ LHLTL +L  Q  D    
Sbjct: 1   MSEENLRLFFALPCPPEQAAAICAWRDDQAIDGRAV--PRDNLHLTLAFLGAQPKDHLDA 58

Query: 60  LRAALAGVTMQPLDLTLDR--------SCTWVDNEDPVSVVQLSEHQGLRRLQHDISLAL 111
           L    A V      LTLDR         C    N +P +++QL E    R     + L  
Sbjct: 59  LLQMAATVQTDSFSLTLDRLTTIGKGFICLQPSNTNP-ALLQLVEALSERLAALGVILDC 117

Query: 112 RRSGFSSRLSGGWTPHITIARNSERAAGPMSLEPIHWTASEFRLVRSHFTRPFRH-EPLD 170
           R           + PH+T++R + R+          W    F L RS  T    H + L 
Sbjct: 118 R----------PFLPHLTLSRQA-RSRPQQPAPDFSWHVDRFVLYRSRNTEDGVHYDELG 166

Query: 171 SYPL 174
           S+PL
Sbjct: 167 SWPL 170