Pairwise Alignments

Query, 400 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 384 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

 Score =  107 bits (267), Expect = 6e-28
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 13/342 (3%)

Query: 26  LFAQGSSSGGPVKIGYAIARTGPWAAGAQVSQEPNYLLWAEQVNAAGGLSVKGTKRPIEL 85
           L A G +    +KIG A A TG  AA   V+    + L A+++NA GG  V G K  I+L
Sbjct: 14  LAAAGLAQAADIKIGVAAALTGG-AAQYGVAIRNGFQLAADEINAKGG--VNGNK--IQL 68

Query: 86  IGYDDRSETETCVRTFEKLMGSDKVDLVLPPWGSGANFAVAPLANRFGYPLLAPTALSRK 145
           +  D++ + E  +  F+KL+  DKV +V  P  S + FA  P+AN     +   +  +  
Sbjct: 69  VVEDEQGKKEEGINVFKKLIFQDKVLMVFGPTLSNSMFAAGPVANGAKTVVFGTSVTANG 128

Query: 146 LIDMRLPFFFSLLQQPDKMMGALVDMLVSQNVKTITIVY-MDDLFGLENFAALNNALKKT 204
           + D+    F + + + D +   +        +K + ++Y  DD F    +      L+  
Sbjct: 129 ITDIGPYVFRNSVMESDVLPVTVATATKHYKLKQVAVIYGNDDAFTKSGYDVFKKVLEDQ 188

Query: 205 SIQVLDRKSYPLGVKDLAPVLRTMKDLNPDAFIGITYPPDTILASRQAREVGFNPKYFYA 264
            + V   ++Y  G  D    L  +K  NPDA I      +      QAR +G    +   
Sbjct: 189 KLPVTTTETYVKGDVDFKAQLTKIKASNPDAVICSCLAEEAANIMLQARGLGIKVPFIGG 248

Query: 265 SVGTAFQLYKNVMAANTEGVIGMGSWNGKTSPEAKAYFDAHTKKFGKEPDRWASGHAWAG 324
           +   + +L++    A     +G    N   +P  KA+  A+ KK+  EP+++A+  A+  
Sbjct: 249 NGFNSPKLFEISKLAGEGTFVGSPWSNTNPAPANKAFVAAYVKKYNAEPNQFAA-QAFDA 307

Query: 325 LQILQQAVEKVGL------DRKALREQIAKNEFKTILGPIRF 360
           L +   A+++V L      DR+AL+  + K       GP +F
Sbjct: 308 LHVAAAALQEVKLSGDIAADREALKNALPKATINGATGPFKF 349