Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 1e-37
 Identities = 90/291 (30%), Positives = 153/291 (52%), Gaps = 18/291 (6%)

Query: 13  GLITGGIYALVAIGLNLQYGLMRIMNISHGEFLMLGAFATWWAHTALGIS-PLLF----- 66
           GL  G +  L AIGL + +G+M I+N++HGE +MLGA+ T+     +  S P LF     
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 67  --MPVAFALLMALGMTVHWLCFRQVAARAPNVDVFEARSLMVGFGLMFLVQNTALLVWGG 124
             +P+AF +  A+G+ +     R +  R          +L+  +G+  ++Q T   ++G 
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRP-------LETLLATWGISLILQQTVRTIFGP 360

Query: 125 DLRGY---DYLADPVQVGEMRFTANKLVLFGVALALSLLLIALLKLTLLGKAVRALMQSP 181
             R      +++   ++G +  T N+L +   ALA+   L+ LLK T +G  +RA+ Q+ 
Sbjct: 361 TNREVGNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNR 420

Query: 182 TGAQLVGINTKRLHPLMFGIGLGLSGVAGALLSMTYEISPSMGEPYTVTALIVITLGGFG 241
             A  +GI T  +  L F +G G++G+AG  LS    +SP++G+ Y + + +V+  GG G
Sbjct: 421 RMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVG 480

Query: 242 SIAGSLVGGLLLGVVEALGMYYTSPSLKMLLSYAVFIGVLIWRPNGLFSRK 292
           ++ G+LVG   LG++      Y    L  +L   + I  +  RP GLF+ K
Sbjct: 481 NLWGTLVGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALK 531