Pairwise Alignments

Query, 299 a.a., Transcriptional regulator of RpiR family in catabolic operon from Variovorax sp. SCN45

Subject, 289 a.a., Phosphogluconate repressor HexR, RpiR family from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (328), Expect = 3e-35
 Identities = 82/275 (29%), Positives = 142/275 (51%), Gaps = 4/275 (1%)

Query: 4   SLLQKIAQIRSDAPATRRAILDLILEDPDRVLEESFEQLAERSRSSVPTIMRTCRDLGFA 63
           +LL++I     D     R + ++IL +P +    S   LA+ +  S PT+ R CR  G +
Sbjct: 6   NLLEQIQSRLEDLNKAERKVAEIILLNPQQATRFSIAALAQAASVSEPTVNRFCRSFGVS 65

Query: 64  GLREFKLALAQELALGGSPLHRRVNIEDAADEVVGKIARSAAASVSGVRGQLDMQVLDGA 123
           G  E KL LAQ LA G + + R V  +D  +    KI  SA AS+      LD  ++  A
Sbjct: 66  GYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTRKIFGSAIASLDSACQALDPNLISRA 125

Query: 124 VAAIAAAPHVDLYGAGATSWFMANDLQARLFRLGLSANAWADYHLQQVAGAAQRPGGVVI 183
           V  +  A  +  +G GA++  +A D Q + FR  L+  A AD  +Q++  +    G + +
Sbjct: 126 VDLLIQARQIHFFGLGASA-PVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTGELFV 184

Query: 184 AISHVGGMPSLLDAVDIARGQGAKVVALTRPGTALAAKADFLLGLSVPDDAVMHVGIDAY 243
            IS+ G    L++   IAR  GA V+ LT  G+ LA  +   L + +P+D  +++ + + 
Sbjct: 185 IISYTGRTRELVEVARIARENGASVLGLTAEGSPLAKASTLSLNIPLPEDTDIYMPMTSR 244

Query: 244 LTHLTAIEILTVLVAQRRG---EPAVQRLQRARDA 275
           +  LT +++L   +  RRG   +P +++++ + +A
Sbjct: 245 IIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNA 279