Pairwise Alignments

Query, 346 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (647), Expect = 6e-72
 Identities = 132/269 (49%), Positives = 183/269 (68%), Gaps = 5/269 (1%)

Query: 9   PRLAVSNLSTSFPTEDGLVRSVADVSFSIQPGKTTALVGESGSGKSVTSLTLMRLLPKTA 68
           P L V NLS SF T DG+V +V +VSF I+PG+T A+VGESGSGKSV++  LM+LLPK A
Sbjct: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64

Query: 69  NAQVSGSASFVTREGKTLDLLRIGEREMRSLRGNQLSMIFQEPMTSLNPVFTIGEQIAES 128
                 S  F   EG+  +LL   + +MR +RG+++ MIFQEPMTSLNP   +G Q+AE+
Sbjct: 65  RIHPESSIMF---EGE--ELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEA 119

Query: 129 VRLHKGLDRKAAMAHARRMLELVEIPAAAQRIDEYPHQLSGGMRQRVMIALAMACDPTLL 188
           +R H+ + +  A      + +LV +P       ++PH+ SGG  QR+MIA+A+  +P +L
Sbjct: 120 IRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDIL 179

Query: 189 IADEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVVVLYAGRVVES 248
           IADEPTTALDVT+QA++L L++ +QA  GM+ILFITH+LGVV   AD V+V+  G VVE 
Sbjct: 180 IADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQ 239

Query: 249 APVRPLFVQPEHPYTQGLLACLPGKARLP 277
                LF+QPEH YT+ L+  +P  ++ P
Sbjct: 240 GSTEQLFLQPEHDYTRMLINSIPKGSKDP 268



 Score =  159 bits (401), Expect = 2e-43
 Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 15/241 (6%)

Query: 29  SVADVSFSIQPGKTTALVGESGSGKSVTSLTLMRLLPKTANAQVSGSASFVTREGKTLDL 88
           +V  +S  ++ G+T  +VGESGSGKS     L+ LLP T      G            D 
Sbjct: 302 AVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQ-----------DF 350

Query: 89  LRIGEREMRSLRGNQLSMIFQEPMTSLNPVFTIGEQIAESVRLHKG-LDRKAAMAHARRM 147
             + E++  +L+   + M+FQ+P  SL+P  T+GE I E + +H+  + +   M  ARR 
Sbjct: 351 RALSEKQRLALK-KDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRA 409

Query: 148 LELVEIPAAAQRIDEYPHQLSGGMRQRVMIALAMACDPTLLIADEPTTALDVTIQAQILE 207
           LE  E+      I+ YPH+ SGG RQR+ IA A+  +P+ ++ DEPT+ALD ++Q  ++E
Sbjct: 410 LE--EVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIE 467

Query: 208 LMRRLQAETGMSILFITHNLGVVAHHADDVVVLYAGRVVESAPVRPLFVQPEHPYTQGLL 267
           L++ +Q    +  LFI+H+L VV   +D V+V+  G+V+E      +F  P+H YT+ L+
Sbjct: 468 LLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLI 527

Query: 268 A 268
           A
Sbjct: 528 A 528