Pairwise Alignments

Query, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  237 bits (605), Expect = 2e-67
 Identities = 130/315 (41%), Positives = 197/315 (62%), Gaps = 9/315 (2%)

Query: 5   LFRYIASRAAGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQATAAD---IARVQKEYGL 61
           + R+   R   ++  + +VA+L+FV+     G   + L  D   AAD   IAR+ +E+GL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 62  DKPLPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPCG 121
           +KPL  +F  ++ ++ Q +LGTS   ++PV   + +R   +  LA+ A+  A +I VP G
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120

Query: 122 IVSAVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFAER 181
            V+A+  G V+D +    A+ G S+P FWLG++++ +FA+   W P  GYG  D  F   
Sbjct: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYG--DGSF--- 175

Query: 182 LHSLVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNALV 241
             +L+LPA  LG+   AL+ R TRA +LDVL  D++RTA SKG+SE+ VV  H  RNALV
Sbjct: 176 -RNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234

Query: 242 PIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLIN 301
            IVT +GL    +IG AV+ E +F  PG+G+L+V +V  RD PV+QG +LVI   +++IN
Sbjct: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294

Query: 302 FSIDLLYAVVDPRVK 316
            ++DL+YA +DPR+K
Sbjct: 295 TAVDLIYAAIDPRIK 309