Pairwise Alignments

Query, 526 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 117/477 (24%), Positives = 198/477 (41%), Gaps = 50/477 (10%)

Query: 48  TLAMVAEPQTLDPMASTADLVGTIMQHVYETLYTFDAKWNVVPMLAEGMPKISADGKTYA 107
           T+A+ +EP TLDP          +  ++YE L    A  ++VP LA   P    D +T+ 
Sbjct: 26  TVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGDLVPGLAADAPT-QVDARTWQ 84

Query: 108 IALRKGVMLHNGRELNADDVVASLQRWMDQSPRGKAVG--KEIDSLKAKGPLAVEIVLKE 165
             LR+G+  HNG   NAD VVAS+ R +D +   + +     +   +    LAV I+   
Sbjct: 85  FKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLGPLSGAEKVDDLAVRIITSA 144

Query: 166 PYAPLLSQLALPSGMAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYSARK 225
           P   L +++     + A  +K++ A   K  VGTGPYKF        + +T    Y    
Sbjct: 145 PDPILPARMYWLKMVPAAYSKNATAIAEKP-VGTGPYKFGTWDRGNSITMTANTDY---- 199

Query: 226 EAASGYGGKREAAIEELRFVPVPNASTRVEGALAGQYD-FADLLP--VEALPRLEKSGGK 282
                +GG  E  I+++ +  V  A TR+ G +AG++D   +LLP   +++P+ +   G 
Sbjct: 200 -----WGG--EPQIDDVTYRFVSEAGTRLSGLVAGEFDVVVNLLPEFADSVPQAKSVSGL 252

Query: 283 TVPIMTPSFGFPYLVLNTKEGVAASQPVRQAIQTALGEGEMLAAGFGDTRFFVAEANHFP 342
              +         ++L           VR+A+  A+    +  + F             P
Sbjct: 253 ETSV---------IILGVDNPAVKDVRVRRALNMAIDRHALAESLFAGNAKVTTGQLVLP 303

Query: 343 KGSPFYSTAGADQYNQRNAAKAKEAAAKAG----YKGEPIRVLTSRQYDFHYNMALLMAE 398
               +  +     Y+ + A K    A  AG      GE  R L  R+      +   +A 
Sbjct: 304 GAFGYNESLENWPYDPQGAKKLIAEAGAAGTTIDLVGEAGRWLKDRE------LIEAVAA 357

Query: 399 QLKRAGFKVDLNVVDWATLVQR----RNDPKLWDVYVTHSGQF---PEPMLSPPQLGDGA 451
                G KV++ +++++  + R     N P  +  +V +S +       M    + G G 
Sbjct: 358 YWTEVGLKVNVEILEFSVYLDRIFDMGNRPDSY--FVLNSNELFDADREMAFAYEPGQGG 415

Query: 452 PGWWETPAKKSALQAFNVESDPAKRGALWGKVQQVVYDE---VPYINVGKFNGLSAK 505
                  A   A++A   E D  KR A +  + + ++DE   VP +N     G+S K
Sbjct: 416 AS-NSDKALGEAIRAARSEVDGEKRKAAYAVITKKLHDEAYDVPLLNHQDIYGMSEK 471