Pairwise Alignments

Query, 526 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 8e-28
 Identities = 130/503 (25%), Positives = 210/503 (41%), Gaps = 41/503 (8%)

Query: 15  LSKRSLLGASLLAMLCAALPQQQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQH 74
           + K   L A ++ +L + L    A AQ      T+A+ +EP TLDP          +  +
Sbjct: 1   MKKIQRLTAGVVMLLASTLAASAAWAQS----ITIAIGSEPSTLDPQLRDDGGERQVNDN 56

Query: 75  VYETLYTFDAKWNVVPMLAEGMPKISADGKTYAIALRKGVMLHNGRELNADDVVASLQRW 134
           +YETL        +VP LA   PK   D  T+   LR GV  HNG   NAD VVAS+ R 
Sbjct: 57  IYETLMARTPTGELVPGLAAQPPK-QVDATTWQFKLRDGVKFHNGEPFNADAVVASVSRV 115

Query: 135 MDQSPRGK--AVGKEIDSLKAKGPLAVEIVLKEPYAPLLSQLALPSGMAAIMAKDSIASP 192
           +D +   +  A    I + +    L V +V   P   L S++     +A   AKD   + 
Sbjct: 116 IDPANNSEQMAYFGTIKTAEKVDDLTVNLVTTGPDPILPSRMYWMKMIAPGYAKDGDLAG 175

Query: 193 LKDFVGTGPYKFKE-RRPDQFVLLTRFDKYSARKEAASGYGGKREAAIEELRFVPVPNAS 251
               VGTGPYKF    R     L+   D           +GG+ +      RFV  P   
Sbjct: 176 AP--VGTGPYKFDSWNRGTDLKLVANADY----------WGGEPQIDDVTYRFVTEP--G 221

Query: 252 TRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVAASQPVR 311
           TR+ G L+G++D    L  E    + K          P       VL T   V     VR
Sbjct: 222 TRLSGLLSGEFDVITNLLPEFTTNVPKFAA------VPGLETSVFVLGTDNEVTKDPKVR 275

Query: 312 QAIQTALGEGEMLAAGFGDTRFFVAEANHF-PKGSPFYSTAGADQYNQRNAAKAKEAAAK 370
           +A+  A+ + + +A G       +A+ +H  P    F       ++   +  KA+    +
Sbjct: 276 EALNLAI-DRKAMAEGLFMGYATLAKGSHINPAAFGFNEKL---EHYPHDIEKARALIKE 331

Query: 371 AGYKGEPIRVL-TSRQYDFHYNMALLMAEQLKRAGFKVDLNVVDWATLVQ--RRNDPKLW 427
           AG +G+P+ V+  S ++         +A      G  V  ++ +++  +     + P+  
Sbjct: 332 AGAEGKPLVVVGESGRWLKDREQIEAVAGYWAETGLNVTTDIQEFSQYLDSLMGDGPRPD 391

Query: 428 DVYVTHSGQF--PEPMLSPPQLGDGAPGWWETPAKKSALQAFNVESDPAKRGALWGKVQQ 485
            +++ +S +    +  +S     DGA          + ++A  VE+D AKR AL+  +Q+
Sbjct: 392 AIFIANSNELLDADREMSFIYHKDGAAASNSDAEMATMIEAARVETDAAKRKALYDDIQK 451

Query: 486 VVYD---EVPYINVGKFNGLSAK 505
             +D    VP  N+    G+S +
Sbjct: 452 KGHDLNYTVPLFNLQDIYGMSER 474